RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CXCL3P19876 107 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 ALOX5APP20292 161 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 PRTN3P24158 256 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 PSME3P61289 254 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 BTN3A2P78410 334 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 KRR1Q13601 381 aaKnown RBP2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR2F1Q13607 317 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 HIST3H3Q16695 136 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 ARHGAP11BQ3KRB8 267 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 LIN52Q52LA3 116 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 ZNF684Q5T5D7 378 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR4M2Q8NGB6 313 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR1J4Q8NGS1 313 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR10X1Q8NGY0 326 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR1P1Q8NH06 330 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 PIFOQ8TCI5 191 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 EEF1AKMT1Q8WVE0 214 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 TMBIM1Q969X1 311 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 TM4SF18Q96CE8 201 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR10C1Q96KK4 312 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 LINC00479Q96M42 142 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 DUX3Q96PT4 197 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 SIGMAR1Q99720 223 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 NRIP2Q9BQI9 281 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 KIFC1Q9BW19 673 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 CHST5Q9GZS9 411 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 PARP12Q9H0J9 701 aaKnown RBP2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 TLNRD1Q9H1K6 362 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 ENY2Q9NPA8 101 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 PARVAQ9NVD7 372 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 NUFIP1Q9UHK0 495 aaKnown RBP2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 FAM32AQ9Y421 112 aaKnown RBP2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 RIMS2Q9UQ26 1411 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 ROCK1Q13464 1354 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 PALLDQ8WX93 1383 aa2.73□□□□□ -1.97
HMGB1P22-201ENST00000505315 IGKV2D-30A0A075B6S6 120 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 LOC389332A0A1B0GUA5 103 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 A0A1B0GV72 72 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 PGPA6NDG6 321 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 FHAD1B1AJZ9 1412 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 B8ZZF3 427 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 DISC1C4P0D8 188 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 TRIM49D1C9J1S8 452 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 K7EQS6 105 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 PLIN3O60664 434 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 CCDC22O60826 627 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 NPIPB7O75200 414 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 SUPT3HO75486 399 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 SERPINB7O75635 380 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 MMP23AO75900 390 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 KCNK2O95069 426 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 HBZP02008 142 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 CD5P06127 495 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 IL3P08700 152 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 SNRPAP09012 282 aaKnown RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 ZNF17P17021 662 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 REG1BP48304 166 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 GFERP55789 205 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 NANOS3P60323 173 aaKnown RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 NAA20P61599 178 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 GRB2P62993 217 aaKnown RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 GTF2BQ00403 316 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 ERCC8Q13216 396 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 POU6F1Q14863 301 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 PTGES3Q15185 160 aaKnown RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 ALX1Q15699 326 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 ZNF544Q6NX49 715 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 HIST2H3AQ71DI3 136 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 GALNT10Q86SR1 603 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 TGIF2LYQ8IUE0 185 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 Q8N377 158 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 GPR32P1Q8NGA4 272 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 OR4M1Q8NGD0 313 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 Q8WTZ3 238 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 GTSF1Q8WW33 167 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 TMA16Q96EY4 203 aaKnown RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 MRPL48Q96GC5 212 aaKnown RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 DCUN1D1Q96GG9 259 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 HDHD3Q9BSH5 251 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 SLC25A39Q9BZJ4 359 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 TRIM4Q9C037 500 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 VSIRQ9H7M9 311 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 C19orf12Q9NSK7 152 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 ZNF391Q9UJN7 358 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 PSG8Q9UQ74 426 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 HDGFL3Q9Y3E1 203 aa2.72□□□□□ -1.97
HMGB1P22-201ENST00000505315 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 A0A0G2JMP0 313 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 A0A0X1KG70 313 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 LOC105371267A0A1B0GV96 52 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 EPM2AB3EWF7 344 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 LAD1O00515 517 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 NOS1APO75052 506 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 OR2A4O95047 310 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 SLC25A14O95258 325 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 NTN1O95631 604 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 IGHV3-13P01766 116 aa2.71□□□□□ -1.98
HMGB1P22-201ENST00000505315 REG1AP05451 166 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms