RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SSBP3Q9BWW4 388 aaPredicted RBP16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 CLN8Q9UBY8 286 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 OR14J1Q9UGF5 321 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 GLS2Q9UI32 602 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 GNB2P62879 340 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 KRTAP1-1Q07627 177 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 IL13RA2Q14627 380 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 OSR2Q8N2R0 312 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 OR10K1Q8NGX5 313 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 RNF167Q9H6Y7 350 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 PLGRKTQ9HBL7 147 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 IL36RNQ9UBH0 155 aa16.11■□□□□ 0.17
PCOLCE-208ENST00000487172 DOCK11Q5JSL3 2073 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 PPIAL4CA0A0B4J2A2 164 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 KIAA1324LA8MWY0 1029 aaPredicted RBP16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 DVL1O14640 695 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 SH2D1BO14796 132 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 NDUFB3O43676 98 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 CD5LO43866 347 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 FCN3O75636 299 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 HAND1O96004 215 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 MSMBP08118 114 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 CALCBP10092 127 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 GTF2F2P13984 249 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 SERPINA2P20848 420 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 LMO1P25800 156 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 ZFP36P26651 326 aaKnown RBP16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 SDC2P34741 201 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 CAPZA1P52907 286 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 SLC22A6Q4U2R8 563 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 LRRC10Q5BKY1 277 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 FAM216BQ8N7L0 139 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 FAM234AQ9H0X4 552 aa16.1■□□□□ 0.17
PCOLCE-208ENST00000487172 A0A0G2JK05 382 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 A0A1B0GW55 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 BPNT1O95861 308 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 TFF1P04155 84 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L2P0CJ85 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L3P0CJ86 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L4P0CJ87 422 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L5P0CJ88 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L6P0CJ89 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L7P0CJ90 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 CEBPDP49716 269 aaPredicted RBP16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DVL1P1P54792 670 aaPredicted RBP16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 CAV3P56539 151 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 OR10A3P58181 314 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 COL10A1Q03692 680 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 Q6P435 159 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4L9Q6RFH8 374 aaPredicted RBP16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 LINC00596Q86U02 117 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 ZNRF1Q8ND25 227 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 POM121Q96HA1 1249 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 CST11Q9H112 138 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 DUX4Q9UBX2 424 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 STEAP1Q9UHE8 339 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 METRNQ9UJH8 293 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 ST3GAL6Q9Y274 331 aa16.09■□□□□ 0.17
PCOLCE-208ENST00000487172 TRAV20A0A0B4J274 112 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 A0A1W2PP11 408 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 IFITM5A6NNB3 132 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 NOTOA8MTQ0 251 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 K7N7A8 449 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 AIPO00170 330 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 ZNF737O75373 536 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 GABARAPO95166 117 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 ECDO95905 644 aaPredicted RBP16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 TGFAP01135 160 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 DUSP1P28562 367 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 RAB11BQ15907 218 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 CD276Q5ZPR3 534 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 SLC16A12Q6ZSM3 486 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 NR2C2APQ86WQ0 139 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 TMEM186Q96B77 213 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 SNX22Q96L94 193 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 SLC25A10Q9UBX3 287 aaPredicted RBP16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 MED13LQ71F56 2210 aa16.08■□□□□ 0.16
PCOLCE-208ENST00000487172 MALRD1Q5VYJ5 2156 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 MAST4O15021 2626 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 FLNAP21333 2647 aaKnown RBP16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 TMEM14DPA8MWL7 114 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 PHF1O43189 567 aaPredicted RBP16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 TMEM127O75204 238 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 LY6G6DO95868 133 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 OR2H2O95918 312 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 TK1P04183 234 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 VSIG8P0DPA2 414 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 SELLP14151 372 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 ARSBP15848 533 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 SNU13P55769 128 aaKnown RBP16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 RBM11P57052 281 aaKnown RBP16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 LSM3P62310 102 aaKnown RBP16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 LCN2P80188 198 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 QRFPP83859 136 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 PAX2Q02962 417 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 IKZF1Q13422 519 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 MPV17LQ2QL34 196 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 GPR107Q5VW38 600 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 OR2W3Q7Z3T1 314 aa16.07■□□□□ 0.16
PCOLCE-208ENST00000487172 CHST4Q8NCG5 386 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms