RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PPIAP62937 165 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 GNG3P63215 75 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SIRPAP78324 504 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 RUNX3Q13761 415 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TMEM249Q2WGJ8 235 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PAQR3Q6TCH7 311 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 MED25Q71SY5 747 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 NR2C2APQ86WQ0 139 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 OR9Q2Q8NGE9 314 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 OR5A1Q8NGJ0 315 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 KLK6Q92876 244 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 GPR45Q9Y5Y3 372 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TRAV9-2A0A087WT02 112 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TRDV1A0A1B0GX56 115 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 H0YIG0 161 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 NME4O00746 187 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 APCSP02743 223 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PLNP26678 52 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ALKBH1Q13686 389 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 SFRP4Q6FHJ7 346 aaPredicted RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 RSPO2Q6UXX9 243 aaPredicted RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 SYT9Q86SS6 491 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 OR51H1Q8NH63 302 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PIGTQ969N2 578 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PTX4Q96A99 478 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SLC26A1Q9H2B4 701 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TAS2R5Q9NYW4 299 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 FOXD3Q9UJU5 478 aaPredicted RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 IGLON5A6NGN9 336 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 LOC730098B7Z3J9 87 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SLC17A2O00624 439 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ZNF749O43361 778 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 BUD23O43709 281 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 CA1P00915 261 aaPredicted RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 PSMB6P28072 239 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 DLX6P56179 175 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 Q6ZVU0 165 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 CMC1Q7Z7K0 106 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 FAM71CQ8NEG0 241 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 OR5AU1Q8NGC0 362 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SLC25A15Q9Y619 301 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 MAP1LC3B2A6NCE7 125 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 CA11O75493 328 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SRSF6Q13247 344 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 GABRA6Q16445 453 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 XKR7Q5GH72 579 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 DPPA4Q7L190 304 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ARPC1AQ92747 370 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PDLIM2Q96JY6 352 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 MAP1LC3BQ9GZQ8 125 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TAAR2Q9P1P5 351 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 DHCR7Q9UBM7 475 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 DOCK11Q5JSL3 2073 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TRAV21A0A0B4J279 112 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SIRPB1O00241 398 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TMPRSS11DO60235 418 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SMIM13P0DJ93 91 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 HLA-GP17693 338 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TNFRSF17Q02223 184 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PIGFQ07326 219 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 APCDD1Q8J025 514 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ZNF480Q8WV37 535 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ZC3HAV1LQ96H79 300 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 MPDZO75970 2070 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TMEM210A6NLX4 147 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 AKR7A3O95154 331 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SOD1P00441 154 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SLC6A1P30531 599 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 MBOAT2Q6ZWT7 520 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TAS1R1Q7RTX1 841 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 CADM4Q8NFZ8 388 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 OR1B1Q8NGR6 318 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 FAM3DQ96BQ1 224 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SLAMF6Q96DU3 332 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SCNM1Q9BWG6 230 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 POLD4Q9HCU8 107 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 LANCL2Q9NS86 450 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 RBFOX1Q9NWB1 397 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 TIAM2Q8IVF5 1701 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 RBFOX3A6NFN3 312 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PSCAO43653 123 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 KIF26BQ2KJY2 2108 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 Q6AWC8 147 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 DNASE2BQ8WZ79 361 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 SLC25A28Q96A46 364 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ZNF778Q96MU6 729 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 PAXXQ9BUH6 204 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 RPRMQ9NS64 109 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 TRBV23-1A0A0A0MS06 115 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 LILRA5A6NI73 299 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 YJEFN3A6XGL0 299 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 CACNG3O60359 315 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 F11P03951 625 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 ZP3P21754 424 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 THBS4P35443 961 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 CD96P40200 585 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 FAM3BP58499 235 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms