RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 YIF1BQ5BJH7 314 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 SPIN3Q5JUX0 258 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 NCR3LG1Q68D85 454 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 DMKNQ6E0U4 476 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-213ENST00000460211 METAP1DQ6UB28 335 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-213ENST00000460211 GDPD3Q7L5L3 318 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 C3orf56Q8N813 242 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 TMEM106AQ96A25 262 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 SNX22Q96L94 193 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 SPACA5Q96QH8 159 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 GPER1Q99527 375 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-213ENST00000460211 NOX4Q9NPH5 578 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 RBFOX1Q9NWB1 397 aaKnown RBP12.29□□□□□ -0.44
ATG4B-213ENST00000460211 CKLFQ9UBR5 152 aa12.29□□□□□ -0.44
ATG4B-213ENST00000460211 SIRT4Q9Y6E7 314 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-213ENST00000460211 F8VVB4 439 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 F8VWA3 439 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 ANGPTL7O43827 346 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 KDM4BO94953 1096 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 LALBAP00709 142 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 CDK1P06493 297 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 PRTN3P24158 256 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 NPBWR2P48146 333 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 BMXP51813 675 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 UBA52P62987 128 aaKnown RBP12.28□□□□□ -0.44
ATG4B-213ENST00000460211 ZNF146Q15072 292 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 NANOGP1Q8N7R0 232 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 ZDHHC22Q8N966 263 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 ZNF485Q8NCK3 441 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 OR5D18Q8NGL1 313 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 RGP1Q92546 391 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-213ENST00000460211 GCDHQ92947 438 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-213ENST00000460211 SLC25A28Q96A46 364 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 MND1Q9BWT6 205 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 HMG20AQ9NP66 347 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 TMEM138Q9NPI0 162 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 SIRT7Q9NRC8 400 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 C19orf12Q9NSK7 152 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 FKBP14Q9NWM8 211 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 TAS2R4Q9NYW5 299 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
ATG4B-213ENST00000460211 ALDOBP05062 364 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 MYF6P23409 242 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 GABRR1P24046 479 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 EDDM3BP56851 147 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 RIPK1Q13546 671 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 DEFB112Q30KQ8 113 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 Q499Y3 187 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 RNLSQ5VYX0 342 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 TMEM200BQ69YZ2 307 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 ZNF529Q6P280 563 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 IZUMO2Q6UXV1 221 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 PDZD9Q8IXQ8 264 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 OR8H2Q8N162 312 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 ZFP41Q8N8Y5 198 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 OR4M1Q8NGD0 313 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 THRSPQ92748 146 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-213ENST00000460211 ANKRD60Q9BZ19 345 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 UNKLQ9H9P5 680 aaKnown RBP12.27□□□□□ -0.45
ATG4B-213ENST00000460211 EXOSC4Q9NPD3 245 aaKnown RBP12.27□□□□□ -0.45
ATG4B-213ENST00000460211 ESM1Q9NQ30 184 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 GSTK1Q9Y2Q3 226 aa12.27□□□□□ -0.45
ATG4B-213ENST00000460211 SF3B6Q9Y3B4 125 aaKnown RBP12.27□□□□□ -0.45
ATG4B-213ENST00000460211 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 TRBV5-5A0A0J9YX44 114 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 PNMA8CA0A1B0GUJ8 204 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 CLDN34H7C241 214 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 ZNF737O75373 536 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 CD1AP06126 327 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 CELP19835 753 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 DUSP1P28562 367 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 BDKRB2P30411 391 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 SNU13P55769 128 aaKnown RBP12.26□□□□□ -0.45
ATG4B-213ENST00000460211 BDH1Q02338 343 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 Q8N7P7 452 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 PXT1Q8NFP0 134 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 TNFAIP8L1Q8WVP5 186 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 DUX5Q96PT3 197 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 S100A13Q99584 98 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 CDCA4Q9BXL8 241 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 FAM192AQ9GZU8 254 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 PRDM13Q9H4Q3 707 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 HEXA-AS1Q9H8Q6 139 aa12.26□□□□□ -0.45
ATG4B-213ENST00000460211 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 hADV38S2A0JD32 116 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 MGST3O14880 152 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 ATP6V1G2O95670 118 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 CALCBP10092 127 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 ZNF44P15621 663 aa12.25□□□□□ -0.45
ATG4B-213ENST00000460211 MAPK3P27361 379 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-213ENST00000460211 ZNF93P35789 620 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-213ENST00000460211 MTNR1BP49286 362 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms