RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 DYRK2Q92630 601 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 SERPINE3A8MV23 424 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 M0R1B8 84 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 RLN1P04808 185 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 FABP6P51161 128 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 GNG3P63215 75 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 CLLU1Q5K131 121 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 WDR86Q86TI4 376 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 MRPS24Q96EL2 167 aaKnown RBP18.03■□□□□ 0.48
PTPRF-207ENST00000436724 SULT4A1Q9BR01 284 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 OCSTAMPQ9BR26 566 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 UBQLN2Q9UHD9 624 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 IQCF6A8MYZ5 107 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 H0YL77 283 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 CHATP28329 748 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 NAAAQ02083 359 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 MICBQ29980 383 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 OR4K15Q8NH41 348 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 CHST6Q9GZX3 395 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 ANAPC10Q9UM13 185 aa18.02■□□□□ 0.48
PTPRF-207ENST00000436724 OR5B21A6NL26 309 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 M0R233 179 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 RHBDL1O75783 438 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 CCKARP32238 428 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 PPA1Q15181 289 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 RELL2Q8NC24 303 aaPredicted RBP18.01■□□□□ 0.47
PTPRF-207ENST00000436724 OR13C8Q8NGS7 320 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 EMG1Q92979 244 aaKnown RBP18.01■□□□□ 0.47
PTPRF-207ENST00000436724 MUCL1Q96DR8 90 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 TMPRSS13Q9BYE2 586 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 ZNF701Q9NV72 531 aaPredicted RBP18.01■□□□□ 0.47
PTPRF-207ENST00000436724 OR7C1O76099 320 aaPredicted RBP18.01■□□□□ 0.47
PTPRF-207ENST00000436724 SIX6O95475 246 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 SELEP16581 610 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 H2BFSP57053 126 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 ZNF573Q86YE8 665 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 MUC20Q8N307 709 aaPredicted RBP18.01■□□□□ 0.47
PTPRF-207ENST00000436724 FAM169BQ8N8A8 192 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 ADAT1Q9BUB4 502 aaKnown RBP18.01■□□□□ 0.47
PTPRF-207ENST00000436724 OR51I2Q9H344 312 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 AK3Q9UIJ7 227 aa18.01■□□□□ 0.47
PTPRF-207ENST00000436724 MCRIP1C9JLW8 97 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 NAT1P18440 290 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 NFYAP23511 347 aaPredicted RBP18■□□□□ 0.47
PTPRF-207ENST00000436724 KLRB1Q12918 225 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 MEF2DQ14814 521 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 MRGPRGQ86SM5 289 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 TMEM200AQ86VY9 491 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 Q8NFD4 153 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 MRGPRFQ96AM1 343 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 ELMOD3Q96FG2 381 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 BCL2L14Q9BZR8 327 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 PLEKHA6Q9Y2H5 1048 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 IGKV1D-8A0A087WSZ0 117 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 UBE2QL1A1L167 161 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 TRAPPC2LH3BP13 241 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 DUSP1P28562 367 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 UBE2MP61081 183 aaKnown RBP18■□□□□ 0.47
PTPRF-207ENST00000436724 RBPJQ06330 500 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 MKXQ8IYA7 352 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 SAXO1Q8IYX7 474 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 OR2AK2Q8NG84 335 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 PCDHB16Q9NRJ7 776 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 PURGQ9UJV8 347 aaKnown RBP18■□□□□ 0.47
PTPRF-207ENST00000436724 HSF4Q9ULV5 492 aa18■□□□□ 0.47
PTPRF-207ENST00000436724 NBASA2RRP1 2371 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 FAM221AA4D161 298 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 DISC1C4P0D8 188 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 TOR2AQ5JU69 321 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 HOGA1Q86XE5 327 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 MARVELD3Q96A59 401 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 RTL8AQ9BWD3 113 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 PIGMQ9H3S5 423 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 MAB21L2Q9Y586 359 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 TPRP12270 2363 aaKnown RBP17.99■□□□□ 0.47
PTPRF-207ENST00000436724 POLEQ07864 2286 aa17.99■□□□□ 0.47
PTPRF-207ENST00000436724 AMY2BP19961 511 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 FGF12P61328 243 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 ARL6IP1Q15041 203 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 MSMPQ1L6U9 139 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 ELP2Q6IA86 826 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 UNQ6126/PRO20091Q6UXV3 157 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 OPN4Q9UHM6 478 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 KALRNO60229 2985 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 SMG1Q96Q15 3661 aaKnown RBP17.98■□□□□ 0.47
PTPRF-207ENST00000436724 L7N2F9 121 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 MLNRO43193 412 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 CBX5P45973 191 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 C17orf107Q6ZR85 190 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 MICU1Q9BPX6 476 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 GSX2Q9BZM3 304 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 ALX4Q9H161 411 aaPredicted RBP17.98■□□□□ 0.47
PTPRF-207ENST00000436724 MSL2Q9HCI7 577 aa17.98■□□□□ 0.47
PTPRF-207ENST00000436724 TRGV8A0A0C4DH27 118 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 OR2AT4A6NND4 320 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 SHOXO15266 292 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 TIMM8AO60220 97 aaPredicted RBP17.97■□□□□ 0.47
PTPRF-207ENST00000436724 PDCD6O75340 191 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 IFNA6P05013 189 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 PRKACAP17612 351 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms