RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 FRYQ5TBA9 3013 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 FCGR2AP12318 317 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 ZNF41P51814 821 aaPredicted RBP20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 FXYD4P59646 89 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 SPSB3Q6PJ21 355 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 BATF2Q8N1L9 274 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 OR2G3Q8NGZ4 309 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 STT3BQ8TCJ2 826 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 PGAM5Q96HS1 289 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 LIPGQ9Y5X9 500 aa20.93■□□□□ 0.94
CSNK1E-203ENST00000396832 TRBV11-1A0A0K0K1C0 115 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 SERPINE3A8MV23 424 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 IGHG1P01857 330 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 PGA4P0DJD7 388 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 PGA3P0DJD8 388 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 ZP4Q12836 540 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 TMEM176BQ3YBM2 270 aaPredicted RBP20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 OR10G3Q8NGC4 313 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 FRZBQ92765 325 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 CDCA3Q99618 268 aaPredicted RBP20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 SUCNR1Q9BXA5 334 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 MRPL13Q9BYD1 178 aaKnown RBP20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 ANGPTL7O43827 346 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 CD38P28907 300 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 SPCS3P61009 180 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 SMAD4Q13485 552 aaKnown RBP20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 TMEM187Q14656 261 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 TVP23CQ96ET8 276 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 C2orf88Q9BSF0 95 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 FGF21Q9NSA1 209 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 ALKBH4Q9NXW9 302 aa20.92■□□□□ 0.94
CSNK1E-203ENST00000396832 GLIPR1P48060 266 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 FBXW12Q6X9E4 464 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 CYB561D1Q8N8Q1 229 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 OR13D1Q8NGV5 346 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 ST8SIA1Q92185 356 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 LYZL4Q96KX0 146 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 PACRGQ96M98 296 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 LIME1Q9H400 295 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 SIRT7Q9NRC8 400 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 IGHV3-15A0A0B4J1V0 119 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 A0A1B0GX78 115 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 ATXN7O15265 892 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 DBHP09172 617 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 FOSL2P15408 326 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 IL13RA2Q14627 380 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 C4orf17Q53FE4 359 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 PRAMEF20Q5VT98 475 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 M1APQ8TC57 530 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 ZNF700Q9H0M5 742 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 CA14Q9ULX7 337 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 SHISA7A6NL88 538 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 NOVA1P51513 510 aaKnown RBP20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 SLC38A9Q8NBW4 561 aa20.91■□□□□ 0.94
CSNK1E-203ENST00000396832 TRIOBPQ9H2D6 2365 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 ST8SIA3O43173 380 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 OR5H8P0DN80 308 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 IL2RGP31785 369 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 THEM4Q5T1C6 240 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 AKR1C8PQ5T2L2 129 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 OGFOD3Q6PK18 319 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 SSC4DQ8WTU2 575 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 NIPSNAP3BQ9BS92 247 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 METTL7AQ9H8H3 244 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 MOB1AQ9H8S9 216 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 PNRC2Q9NPJ4 139 aaKnown RBP20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 PISDQ9UG56 409 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 MUC3AQ02505 3323 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 RRP8O43159 456 aaKnown RBP20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 TMEM225BP0DP42 221 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 PDCD1Q15116 288 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 NAA60Q9H7X0 242 aa20.9■□□□□ 0.94
CSNK1E-203ENST00000396832 EXPH5Q8NEV8 1989 aa20.89■□□□□ 0.94
CSNK1E-203ENST00000396832 ATP6V0CP27449 155 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 PHLDA2Q53GA4 152 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 CRIP3Q6Q6R5 217 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 POC1BQ8TC44 478 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 RTN4IP1Q8WWV3 396 aaPredicted RBP20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 DECR2Q9NUI1 292 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 PLEKHJ1Q9NW61 149 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 TRAF3IP2O43734 574 aaPredicted RBP20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 DUSP1P28562 367 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 ABCA11PQ4W5N1 156 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 CRLF2Q9HC73 371 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 KIAA1456Q9P272 454 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 AK3Q9UIJ7 227 aa20.89■□□□□ 0.93
CSNK1E-203ENST00000396832 COL5A1P20908 1838 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 IGHV1OR21-1A0A087WYE8 117 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 SLC33A1O00400 549 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 SPRY1O43609 319 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF43P17038 809 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 EWSR1Q01844 656 aaKnown RBP eCLIP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 USF2Q15853 346 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 LBHQ53QV2 105 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 TGIF2LXQ8IUE1 241 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 MVB12AQ96EY5 273 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 FAM210BQ96KR6 192 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 FOXD3Q9UJU5 478 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms