RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CNN1P51911 297 aaKnown RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 BPIFB3P59826 476 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 MPV17LQ2QL34 196 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 TSEN54Q7Z6J9 526 aaKnown RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 LDLRAD3Q86YD5 345 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 OR10V1Q8NGI7 309 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 EDARADDQ8WWZ3 215 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 NEIL1Q96FI4 390 aaPredicted RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 MCM3APO60318 1980 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 ACAA2P42765 397 aaKnown RBP14.09□□□□□ -0.15
COL17A1-202ENST00000369733 FUT5Q11128 374 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 SLC26A10Q8NG04 563 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 CACFD1Q9UGQ2 172 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 PRSS50Q9UI38 385 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 STARD10Q9Y365 291 aa14.09□□□□□ -0.15
COL17A1-202ENST00000369733 TRAV34A0A0B4J273 112 aa14.08□□□□□ -0.15
COL17A1-202ENST00000369733 SPINK4O60575 86 aa14.08□□□□□ -0.15
COL17A1-202ENST00000369733 HOXD4P09016 255 aaPredicted RBP14.08□□□□□ -0.15
COL17A1-202ENST00000369733 UBE2V2Q15819 145 aa14.08□□□□□ -0.15
COL17A1-202ENST00000369733 WNT2BQ93097 391 aa14.08□□□□□ -0.15
COL17A1-202ENST00000369733 ESRP2Q9H6T0 727 aaKnown RBP14.08□□□□□ -0.15
COL17A1-202ENST00000369733 CT45A10P0DMU9 189 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 H2BFSP57053 126 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 SKP2Q13309 424 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-202ENST00000369733 SERTM2A0A1B0GWG4 89 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 CHST1O43916 411 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 CDC34P49427 236 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-202ENST00000369733 SPATA46Q5T0L3 261 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 LYZL2Q7Z4W2 148 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 PCM1Q15154 2024 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 C16orf47Q6ZP98 133 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-202ENST00000369733 TWSG1Q9GZX9 223 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 OR5AC2Q9NZP5 309 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 BMP5P22003 454 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 CD81P60033 236 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 ERHP84090 104 aaKnown RBP14.08□□□□□ -0.16
COL17A1-202ENST00000369733 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 PTX4Q96A99 478 aa14.08□□□□□ -0.16
COL17A1-202ENST00000369733 ARID1AO14497 2285 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 TMEM30CPA0ZSE6 113 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 HOXC4P09017 264 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-202ENST00000369733 FGF2P09038 288 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 SULT1A2P50226 295 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 MOB1BQ7L9L4 216 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 OR1L3Q8NH93 324 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 IFI44Q8TCB0 444 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 GPBAR1Q8TDU6 330 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 NOL4LQ96MY1 436 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-202ENST00000369733 DECR2Q9NUI1 292 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 SLC31A2O15432 143 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 MYF5P13349 255 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 ZNF32P17041 273 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 SFTPA1Q8IWL2 248 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 ANAPC16Q96DE5 110 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 COMMD5Q9GZQ3 224 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 A0A1W2PPC1 479 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 BGLAPP02818 100 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 CTGFP29279 349 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 GNG3P63215 75 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 LAMTOR1Q6IAA8 161 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 FAM173AQ9BQD7 235 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 PITPNC1Q9UKF7 332 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 OR5H1A6NKK0 313 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 LRRC30A6NM36 301 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 COX7A2P2O60397 106 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 ZNF205O95201 554 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 GABRG2P18507 467 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 PRDX4Q13162 271 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 C6orf15Q6UXA7 325 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-202ENST00000369733 CCDC74BQ96LY2 380 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 DEFB127Q9H1M4 99 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 SLC2A9Q9NRM0 540 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 SH3BGRL2Q9UJC5 107 aa14.07□□□□□ -0.16
COL17A1-202ENST00000369733 LMO7DNF2Z398 122 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 CA5BP1Q8WTZ4 195 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 ADAT3Q96EY9 351 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-202ENST00000369733 TLNRD1Q9H1K6 362 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 VAX2Q9UIW0 290 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 TMEM11P17152 192 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 OR6X1Q8NH79 312 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 FOXQ1Q9C009 403 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 TRBV5-5A0A0J9YX44 114 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 RPEL1Q2QD12 228 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 RNASEKQ6P5S7 137 aaKnown RBP14.06□□□□□ -0.16
COL17A1-202ENST00000369733 MSL2Q9HCI7 577 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 A0A1W2PQD3 144 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 MPTX1A8MV57 137 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 PRSS12P56730 875 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 NUFIP2Q7Z417 695 aaKnown RBP14.06□□□□□ -0.16
COL17A1-202ENST00000369733 FAM122AQ96E09 287 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 MS4A3Q96HJ5 214 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 TMEM147Q9BVK8 224 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 MANBALQ9NQG1 85 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 SIT1Q9Y3P8 196 aa14.06□□□□□ -0.16
COL17A1-202ENST00000369733 PIAS2O75928 621 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ZXDAP98168 799 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 FAM3AP98173 230 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ETFRF1Q6IPR1 90 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms