RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SIGIRRQ6IA17 410 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 RAB12Q6IQ22 244 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 LINC00596Q86U02 117 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 C1orf87Q8N0U7 546 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 MFSD4AQ8N468 514 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 DTX3Q8N9I9 347 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 OR56B1Q8NGI3 324 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 TACC2O95359 2948 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 LYNX1G3V0Z9 82 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 SOCS1O15524 211 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 SCGNO76038 276 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 KNG1P01042 644 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 LYNX1P0DP58 116 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 DAOP14920 347 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 TALDO1P37837 337 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 BOLLQ8N9W6 283 aaKnown RBP22.71■■□□□ 1.23
SSBP4-202ENST00000348495 DIABLOQ9NR28 239 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 ZNF701Q9NV72 531 aaPredicted RBP22.71■■□□□ 1.23
SSBP4-202ENST00000348495 SPG11Q96JI7 2443 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 GABRR1P24046 479 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 SNU13P55769 128 aaKnown RBP22.71■■□□□ 1.23
SSBP4-202ENST00000348495 TMEM50BP56557 158 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 MPV17LQ2QL34 196 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 TEX36Q5VZQ5 186 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 OR10R2Q8NGX6 335 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 TSC22D3Q99576 134 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 IFT22Q9H7X7 185 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 NLKQ9UBE8 527 aa22.71■■□□□ 1.23
SSBP4-202ENST00000348495 DUSP1P28562 367 aa22.7■■□□□ 1.22
SSBP4-202ENST00000348495 CD80P33681 288 aa22.7■■□□□ 1.22
SSBP4-202ENST00000348495 PLAC9Q5JTB6 97 aa22.7■■□□□ 1.22
SSBP4-202ENST00000348495 SPANXN2Q5MJ10 180 aa22.7■■□□□ 1.22
SSBP4-202ENST00000348495 FIP1L1Q6UN15 594 aaKnown RBP22.7■■□□□ 1.22
SSBP4-202ENST00000348495 FABP12A6NFH5 140 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 MNDAP41218 407 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 PTH2RP49190 550 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 PDCD1Q15116 288 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 TMEM69Q5SWH9 247 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 SFRP4Q6FHJ7 346 aaPredicted RBP22.69■■□□□ 1.22
SSBP4-202ENST00000348495 Q6P435 159 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 IZUMO1Q8IYV9 350 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 C19orf18Q8NEA5 215 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 PHF21AQ96BD5 680 aa22.69■■□□□ 1.22
SSBP4-202ENST00000348495 SEBOXQ9HB31 216 aaPredicted RBP22.69■■□□□ 1.22
SSBP4-202ENST00000348495 PAX1P15863 534 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 BLVRBP30043 206 aaPredicted RBP22.68■■□□□ 1.22
SSBP4-202ENST00000348495 RTN4RL2Q86UN3 420 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 S100ZQ8WXG8 99 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 RCC2Q9P258 522 aaKnown RBP22.68■■□□□ 1.22
SSBP4-202ENST00000348495 PLEKHA6Q9Y2H5 1048 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 WIPI2Q9Y4P8 454 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 IGHV3OR15-7A0A075B7D8 119 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 OOEPA6NGQ2 149 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 OR2AT4A6NND4 320 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 OR7C1O76099 320 aaPredicted RBP22.68■■□□□ 1.22
SSBP4-202ENST00000348495 TPPPO94811 219 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 ZNF205O95201 554 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 IGHV4-39P01824 125 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 HLA-DQB1P01920 261 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 PSG2P11465 335 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 MUC1P15941 1255 aaPredicted RBP22.68■■□□□ 1.22
SSBP4-202ENST00000348495 NR4A2P43354 598 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 IKZF1Q13422 519 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 MADCAM1Q13477 382 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 DNAJB11Q9UBS4 358 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 ZNF222Q9UK12 451 aa22.68■■□□□ 1.22
SSBP4-202ENST00000348495 IGKV1D-17A0A075B6S4 117 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 TRAV18A0A075B6X5 111 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 PPIAL4EA0A075B759 164 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 RFPL4AA6NLU0 287 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 PPIAL4DF5H284 164 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 RFPL4AL1F8VTS6 287 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 LGALS8O00214 317 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 FSTL3O95633 263 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 PPIAL4FP0DN26 164 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 CHATP28329 748 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 TAS2R20P59543 309 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 ZNF45Q02386 682 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 ZNF79Q15937 498 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 MICBQ29980 383 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 BAIAP2L2Q6UXY1 529 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 ANGPTL6Q8NI99 470 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 RAB3CQ96E17 227 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 CYYR1Q96J86 154 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 ABHD1Q96SE0 405 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 HSF4Q9ULV5 492 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 KCNK7Q9Y2U2 307 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 PPIAL4AQ9Y536 164 aa22.67■■□□□ 1.22
SSBP4-202ENST00000348495 A0A0G2JMP0 313 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 A0A0X1KG70 313 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 CLDN25C9JDP6 229 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 HAND1O96004 215 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 STUMQ69YW2 141 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 FAM131AQ6UXB0 335 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 OR4M2Q8NGB6 313 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 OR5T2Q8NGG2 359 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 ARHGAP5-AS1Q96IT6 56 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 CHODLQ9H9P2 273 aa22.66■■□□□ 1.22
SSBP4-202ENST00000348495 SH2D1BO14796 132 aa22.65■■□□□ 1.22
SSBP4-202ENST00000348495 PDCD6O75340 191 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms