RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 IGFBP7Q16270 282 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 ADPRHL1Q8NDY3 354 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 PP6455Q8WZ26 134 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 RIGQ13278 110 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 TOMM34Q15785 309 aaPredicted RBP10.81□□□□□ -0.68
PCF11-201ENST00000298281 DLEU7Q6UYE1 221 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 SLC25A26Q70HW3 274 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 PTPMT1Q8WUK0 201 aaPredicted RBP10.81□□□□□ -0.68
PCF11-201ENST00000298281 MED30Q96HR3 178 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 CLDN15P56746 228 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 ZNF766Q5HY98 468 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 N4BP2Q86UW6 1770 aaPredicted RBP10.81□□□□□ -0.68
PCF11-201ENST00000298281 M0R143 59 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 ABHD3Q8WU67 409 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 SIGLEC1Q9BZZ2 1709 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 A6NDN8 102 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 FRG2CA6NGY1 282 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 ZAR1LA6NP61 321 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 GPANK1O95872 356 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 RPL18Q07020 188 aaKnown RBP10.81□□□□□ -0.68
PCF11-201ENST00000298281 PET117Q6UWS5 81 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 C16orf92Q96LL3 132 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 CHRNA10Q9GZZ6 450 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 OCIAD1Q9NX40 245 aa10.81□□□□□ -0.68
PCF11-201ENST00000298281 CDS2O95674 445 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 CST4P01036 141 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 PI3P19957 117 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 METAP1P53582 386 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 AQP6Q13520 282 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 CELF2-AS1Q8N7Q2 184 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 OR4S1Q8NGB4 309 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 ZNF552Q9H707 407 aaPredicted RBP10.8□□□□□ -0.68
PCF11-201ENST00000298281 ISL1P61371 349 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 OSR2Q8N2R0 312 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 EXTL1Q92935 676 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 LTB4R2Q9NPC1 389 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 ASCL3Q9NQ33 180 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 RCL1Q9Y2P8 373 aaKnown RBP10.8□□□□□ -0.68
PCF11-201ENST00000298281 TMEM202A6NGA9 273 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 PRF1P14222 555 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 FUT6P51993 359 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 SLC35B1P78383 322 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 GABRA6Q16445 453 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 PARM1Q6UWI2 310 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 OR4C3Q8NH37 302 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 HCSTQ9UBK5 93 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 IFITM5A6NNB3 132 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 HRO43593 1189 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 KIR2DS2P43631 304 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 OR2D2Q9H210 308 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 GDF2Q9UK05 429 aaPredicted RBP10.8□□□□□ -0.68
PCF11-201ENST00000298281 CXorf51AA0A1B0GTR3 108 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 AP4M1O00189 453 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 ADRB1P08588 477 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 CCSMST1Q4G0I0 132 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 ANKRD33Q7Z3H0 272 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 CST7O76096 145 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 HIST1H1BP16401 226 aaKnown RBP10.8□□□□□ -0.68
PCF11-201ENST00000298281 HMGA1P17096 107 aaKnown RBP10.8□□□□□ -0.68
PCF11-201ENST00000298281 TRAT1Q6PIZ9 186 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 TDHQ8IZJ6 230 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 APOBEC3DQ96AK3 386 aaPredicted RBP10.8□□□□□ -0.68
PCF11-201ENST00000298281 SLC25A33Q9BSK2 321 aa10.8□□□□□ -0.68
PCF11-201ENST00000298281 FPR2P25090 351 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 WNT3P56703 355 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 DMRTC1Q5HYR2 192 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 Q8WTZ3 238 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 C2orf50Q96LR7 162 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 C6orf106Q9H6K1 298 aaPredicted RBP10.79□□□□□ -0.68
PCF11-201ENST00000298281 PCMT1P22061 227 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 DERL3Q96Q80 235 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 MBNL1Q9NR56 388 aaKnown RBP10.79□□□□□ -0.68
PCF11-201ENST00000298281 C1RLQ9NZP8 487 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 MYOFQ9NZM1 2061 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 A0A1W2PR80 420 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 CORTO00230 105 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 CD3EP07766 207 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 OR5AC1P0C628 307 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 COL8A1P27658 744 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 EID2BQ96D98 161 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 GPA33Q99795 319 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 PCGF1Q9BSM1 259 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 KIAA1217Q5T5P2 1943 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 CLEC2LP0C7M8 214 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 GFRA1P56159 465 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 CLEC2AQ6UVW9 174 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 SPEM1Q8N4L4 309 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 P2RX4Q99571 388 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 FGF17O60258 216 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 PRSS36Q5K4E3 855 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
PCF11-201ENST00000298281 LILRA3Q8N6C8 439 aaPredicted RBP10.79□□□□□ -0.68
PCF11-201ENST00000298281 C16orf52Q8NHV5 167 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 PARP11Q9NR21 331 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 ZNF121P58317 390 aaPredicted RBP10.79□□□□□ -0.68
PCF11-201ENST00000298281 ADAT3Q96EY9 351 aaPredicted RBP10.79□□□□□ -0.68
PCF11-201ENST00000298281 PERPQ96FX8 193 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 LINC00615Q96LM1 132 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms