RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ATXN7O15265 892 aaPredicted RBP19.41■□□□□ 0.7
PTX3-201ENST00000295927 TRAPPC2P0DI81 140 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 TRAPPC2BP0DI82 140 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 PPP3CBP16298 524 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 AMY2BP19961 511 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 KLF3P57682 345 aaPredicted RBP19.41■□□□□ 0.7
PTX3-201ENST00000295927 ADORA2A-AS1P86434 159 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 MAB21L1Q13394 359 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 MPV17LQ2QL34 196 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 C11orf91Q3C1V1 193 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 IDO2Q6ZQW0 420 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 BEST4Q8NFU0 473 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 DYRK2Q92630 601 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 CMSS1Q9BQ75 279 aaKnown RBP19.41■□□□□ 0.7
PTX3-201ENST00000295927 SYT3Q9BQG1 590 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 RHOFQ9HBH0 211 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 ZNF701Q9NV72 531 aaPredicted RBP19.41■□□□□ 0.7
PTX3-201ENST00000295927 COQ3Q9NZJ6 369 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 SCP2D1Q9UJQ7 156 aa19.41■□□□□ 0.7
PTX3-201ENST00000295927 COL6A6A6NMZ7 2263 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 UBE2QL1A1L167 161 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 FAM90A27PA6NNH2 459 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 CCNKO75909 580 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 DUSP1P28562 367 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 SCGB2B2Q4G0G5 96 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 SLC2A8Q9NY64 477 aa19.4■□□□□ 0.7
PTX3-201ENST00000295927 MRPS15P82914 257 aaKnown RBP19.39■□□□□ 0.7
PTX3-201ENST00000295927 ACTBL2Q562R1 376 aa19.39■□□□□ 0.7
PTX3-201ENST00000295927 GTF3AQ92664 365 aaKnown RBP19.39■□□□□ 0.7
PTX3-201ENST00000295927 IGLV3-9A0A075B6K5 115 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 ABCD4O14678 606 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 PGA5P0DJD9 388 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 ANXA7P20073 488 aaKnown RBP19.39■□□□□ 0.69
PTX3-201ENST00000295927 PMELP40967 661 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 ERVK11-1P61568 191 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 BSPH1Q075Z2 132 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 IKZF1Q13422 519 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 FBXL19-AS1Q494R0 122 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 LINC00596Q86U02 117 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 C11orf53Q8IXP5 236 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 NUP37Q8NFH4 326 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 PRRT1Q99946 306 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 ZNF442Q9H7R0 627 aa19.39■□□□□ 0.69
PTX3-201ENST00000295927 RCC2Q9P258 522 aaKnown RBP19.39■□□□□ 0.69
PTX3-201ENST00000295927 IFNA6P05013 189 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 MECP2P51608 486 aaKnown RBP19.38■□□□□ 0.69
PTX3-201ENST00000295927 RRAS2P62070 204 aaPredicted RBP19.38■□□□□ 0.69
PTX3-201ENST00000295927 CBX3Q13185 183 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 IL13RA2Q14627 380 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 PRAMEF6Q5VXH4 476 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 Q8IYB0 196 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 OR2Z1Q8NG97 314 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 OR13C8Q8NGS7 320 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 OR6F1Q8NGZ6 308 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 NRIP2Q9BQI9 281 aa19.38■□□□□ 0.69
PTX3-201ENST00000295927 SLC25A21Q9BQT8 299 aaPredicted RBP19.38■□□□□ 0.69
PTX3-201ENST00000295927 MRPL37Q9BZE1 423 aaKnown RBP19.38■□□□□ 0.69
PTX3-201ENST00000295927 PRAF2O60831 178 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 DTYMKP23919 212 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 ST3GAL2Q16842 350 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 VAX1Q5SQQ9 334 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 OR5H2Q8NGV7 314 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 LILRB4Q8NHJ6 448 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 DACT3Q96B18 629 aaPredicted RBP19.37■□□□□ 0.69
PTX3-201ENST00000295927 TLNRD1Q9H1K6 362 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 OR51J1Q9H342 316 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 IGKV1D-8A0A087WSZ0 117 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 A0A1B0GUH1 482 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 FAM221AA4D161 298 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 NKX2-6A6NCS4 301 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 ZSCAN5BA6NJL1 495 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 RLN1P04808 185 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 FCGR3AP08637 254 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 ACAA1P09110 424 aaPredicted RBP19.37■□□□□ 0.69
PTX3-201ENST00000295927 ZMYND11Q15326 602 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 MPPED2Q15777 294 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 SLC22A25Q6T423 547 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 ZNF826PQ6ZT77 177 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 RNASE6Q93091 150 aaKnown RBP19.37■□□□□ 0.69
PTX3-201ENST00000295927 CA10Q9NS85 328 aa19.37■□□□□ 0.69
PTX3-201ENST00000295927 NBASA2RRP1 2371 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 A8MV72 311 aaPredicted RBP19.36■□□□□ 0.69
PTX3-201ENST00000295927 TPD52L2O43399 206 aaKnown RBP19.36■□□□□ 0.69
PTX3-201ENST00000295927 TAS2R46P59540 309 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 ST6GAL2Q96JF0 529 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 CHST6Q9GZX3 395 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 NGBQ9NPG2 151 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 TAAR3PQ9P1P4 343 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 EDARQ9UNE0 448 aa19.36■□□□□ 0.69
PTX3-201ENST00000295927 CHD3Q12873 2000 aaKnown RBP19.36■□□□□ 0.69
PTX3-201ENST00000295927 A6NLC8 198 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 HPXP02790 462 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 OR3A3P47888 321 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 SELENOVP59797 346 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 GMFBP60983 142 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 MZT1Q08AG7 82 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 GLDNQ6ZMI3 551 aaPredicted RBP19.35■□□□□ 0.69
PTX3-201ENST00000295927 POC1AQ8NBT0 407 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 OR5AP2Q8NGF4 316 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 MRGPRFQ96AM1 343 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms