RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 RAI1Q7Z5J4 1906 aaPredicted RBP15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 A0A1B0GVG6 124 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 SRRM5B3KS81 715 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 SOCS1O15524 211 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 ORC5O43913 435 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 NXPH2O95156 264 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 PTTG1O95997 202 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 LHBP01229 141 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 PRKACAP17612 351 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 TMEM50BP56557 158 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 TAF9Q16594 264 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 C20orf204Q6ZNR8 217 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 ZNF295-AS1Q8N0V1 137 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 OR11L1Q8NGX0 322 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 RNF7Q9UBF6 113 aa15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 CHD3Q12873 2000 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-202ENST00000284770 LINC00854A0A1B0GVQ3 168 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 C3orf80F5H4A9 247 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GEMIN2O14893 280 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 HPXP02790 462 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GLRA1P23415 457 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GDNFP39905 211 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 PLAC9Q5JTB6 97 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 RTN4RL2Q86UN3 420 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GCSAMQ8N6F7 178 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 C11orf54Q9H0W9 315 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 WDR13Q9H1Z4 485 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 ZMAT3Q9HA38 289 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 RASL12Q9NYN1 266 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 IL36RNQ9UBH0 155 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 KLK11Q9UBX7 282 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 ELF5Q9UKW6 265 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 HELZ2Q9BYK8 2649 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 H7C417 338 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 WNT9BO14905 357 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 MELTFP08582 738 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GABRR1P24046 479 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 PRSS3P35030 304 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 RBMXP38159 391 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 RFX2P48378 723 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GMFBP60983 142 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GUCA2AQ02747 115 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 ZNF57Q68EA5 555 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 Q6ZNX1 250 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 GDPD3Q7L5L3 318 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 MINDY2Q8NBR6 621 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 HPS1Q92902 700 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 C14orf79Q96F83 325 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 TREM2Q9NZC2 230 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 CACNA1DQ01668 2161 aa15.92■□□□□ 0.14
PDLIM3-202ENST00000284770 UTP20O75691 2785 aaKnown RBP15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 USP9YO00507 2555 aaPredicted RBP15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A10PA6NDY2 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A18PA6NE21 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A16PA6NEW6 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A20PA6NIJ5 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A8PA6NJQ4 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A7PA6NKC0 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 LRRC30A6NM36 301 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A22PA8MWA6 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A12PA8MX19 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A5PA8MXJ8 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A23PA8MXZ1 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 SSX4O60224 188 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A15PP0C7V4 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A13PP0C7W8 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A14PP0C7W9 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A24PP0C7X0 464 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 IRF2P14316 349 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 INPP1P49441 399 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 HOXA4Q00056 320 aaPredicted RBP15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 TRIM16LQ309B1 348 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 CDNFQ49AH0 187 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 ACP7Q6ZNF0 438 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 LINC00596Q86U02 117 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 TGIF2LYQ8IUE0 185 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 CHST4Q8NCG5 386 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 GPX8Q8TED1 209 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 SEH1LQ96EE3 360 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 KCNK7Q9Y2U2 307 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 NPTNQ9Y639 398 aa15.91■□□□□ 0.14
PDLIM3-202ENST00000284770 TMEM235A6NFC5 223 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 SULT1C2O00338 296 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 GNB3P16520 340 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 EGR1P18146 543 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 BLVRBP30043 206 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 SNU13P55769 128 aaKnown RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 KLF9Q13886 244 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 IL13RA2Q14627 380 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 ZNF146Q15072 292 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 SMIM21Q3B7S5 101 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 SPIN3Q5JUX0 258 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 SIGIRRQ6IA17 410 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 FIP1L1Q6UN15 594 aaKnown RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 Q6ZTK2 550 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 TOMM5Q8N4H5 51 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 NEU4Q8WWR8 484 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 RAB3CQ96E17 227 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 SCPEP1Q9HB40 452 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 MTFP1Q9UDX5 166 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms