RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 BLMHQ13867 455 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 IRF3Q14653 427 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 GRK1Q15835 563 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 SPIN3Q5JUX0 258 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 FAM27D1Q5T7N8 215 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 ATPAF1Q5TC12 328 aaPredicted RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 GPR157Q5UAW9 335 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 AWAT2Q6E213 333 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 RBMS3Q6XE24 437 aaKnown RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 C1orf229Q6ZS94 237 aaPredicted RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 TRAPPC6BQ86SZ2 158 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 MS4A15Q8N5U1 240 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 NKAIN3Q8N8D7 197 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 PPP1R35Q8TAP8 253 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 LHX4Q969G2 390 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 MUL1Q969V5 352 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 SDSLQ96GA7 329 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 WDFY2Q96P53 400 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 DCTN5Q9BTE1 182 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 METTL9Q9H1A3 318 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 CNTD2Q9H8S5 307 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 HES4Q9HCC6 221 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 ACOT13Q9NPJ3 140 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 SIRT7Q9NRC8 400 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 OPN4Q9UHM6 478 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 ZNF222Q9UK12 451 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 MRPS28Q9Y2Q9 187 aaKnown RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 POLR3KQ9Y2Y1 108 aaPredicted RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 MAB21L2Q9Y586 359 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 FLNAP21333 2647 aaKnown RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 TRBV5-7A0A0A0MS05 114 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 TRBV23-1A0A0A0MS06 115 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 A0A1W2PRD5 423 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 A0A1W2PRF3 423 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 A0A1W2PRM7 423 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 TNFRSF13BO14836 293 aaPredicted RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 DEGS1O15121 323 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 FCN3O75636 299 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 CRTAPO75718 401 aaPredicted RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 ARL6IP5O75915 188 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 ALX3O95076 343 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 OR2H2O95918 312 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 TK1P04183 234 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 CD1AP06126 327 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 IGHV4-38-2P0DP08 117 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 CPEP16870 476 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 FPR2P25090 351 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 PSMA1P25786 263 aaKnown RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 CALRP27797 417 aaKnown RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 PTGFRP43088 359 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 MTNR1BP49286 362 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 BMXP51813 675 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 CAV3P56539 151 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 ZP1P60852 638 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 RPL31P62899 125 aaKnown RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 SRSF2Q01130 221 aaKnown RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 EMX1Q04741 257 aaPredicted RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 PAX8Q06710 450 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 GPR50Q13585 617 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 ATXN7L3Q14CW9 347 aaPredicted RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 PDCD1Q15116 288 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 TRAM1Q15629 374 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 NEDD8Q15843 81 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 PIGYQ3MUY2 71 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 SLC22A6Q4U2R8 563 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 GLT8D1Q68CQ7 371 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 ASPHD2Q6ICH7 369 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 GLIPR1L1Q6UWM5 242 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 BRD3OSQ6XYD6 125 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 VMO1Q7Z5L0 202 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 SAXO1Q8IYX7 474 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 SPARTQ8N0X7 666 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 TPRX1Q8N7U7 411 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 NEK7Q8TDX7 302 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 ZNF418Q8TF45 676 aaPredicted RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 FCGR1BQ92637 280 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 SLC6A7Q99884 636 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 YTHDF1Q9BYJ9 559 aaKnown RBP5.4□□□□□ -1.54
CD44-204ENST00000279452 PPA2Q9H2U2 334 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 VCX3AQ9NNX9 186 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 HMG20AQ9NP66 347 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 C19orf12Q9NSK7 152 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 NUP50Q9UKX7 468 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 FOXJ3Q9UPW0 622 aa5.4□□□□□ -1.54
CD44-204ENST00000279452 HIVEP1P15822 2718 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 hCG_1809904A0A1W2PP81 198 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 A0A1W2PPE2 198 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 A0A1W2PR64 198 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 A0A1W2PRV1 198 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 TMEM82A0PJX8 343 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 CCRL2O00421 344 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PIN1P1O15428 100 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 TCF21O43680 179 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 MRPS14O60783 128 aaKnown RBP5.39□□□□□ -1.55
CD44-204ENST00000279452 ZNF780AO75290 641 aaPredicted RBP5.39□□□□□ -1.55
CD44-204ENST00000279452 OR7C1O76099 320 aaPredicted RBP5.39□□□□□ -1.55
CD44-204ENST00000279452 TNFAIP8O95379 198 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ALDOBP05062 364 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 GTF2F2P13984 249 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 CCL3L1P16619 93 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms