RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RBM11P57052 281 aaKnown RBP11.76□□□□□ -0.53
VPS25-201ENST00000253794 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
VPS25-201ENST00000253794 C11orf91Q3C1V1 193 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 ZNF841Q6ZN19 808 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 USP43Q70EL4 1123 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 OSR2Q8N2R0 312 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 PTX4Q96A99 478 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 SLC25A46Q96AG3 418 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 NEIL1Q96FI4 390 aaPredicted RBP11.76□□□□□ -0.53
VPS25-201ENST00000253794 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 CST11Q9H112 138 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 IL36RNQ9UBH0 155 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 ING4Q9UNL4 249 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
VPS25-201ENST00000253794 SMIM31A0A1B0GVY4 71 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 RFPL4AA6NLU0 287 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 RFPL4AL1F8VTS6 287 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 CSTBP04080 98 aaKnown RBP11.75□□□□□ -0.53
VPS25-201ENST00000253794 HEXAP06865 529 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 CHRM2P08172 466 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 ARSBP15848 533 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 PRDX2P32119 198 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 NPY4RP50391 375 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 GMFBP60983 142 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 IL13RA1P78552 427 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 UNC119Q13432 240 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 Q6P435 159 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 LYPD2Q6UXB3 125 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 NLRC3Q7RTR2 1065 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 ZNF561Q8N587 486 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 CHST4Q8NCG5 386 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 OR10K1Q8NGX5 313 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 MED30Q96HR3 178 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 Q96M66 194 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 TM2D1Q9BX74 207 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 FAM234AQ9H0X4 552 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 ELL3Q9HB65 397 aaPredicted RBP11.75□□□□□ -0.53
VPS25-201ENST00000253794 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 ZANQ9Y493 2812 aa11.75□□□□□ -0.53
VPS25-201ENST00000253794 A0A1W2PP11 408 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 H3BMQ9 156 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 GPR37O15354 613 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 ADAM20O43506 726 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 ZNF737O75373 536 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 FCN3O75636 299 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 HTR3BO95264 441 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 HAND1O96004 215 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 CALCBP10092 127 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 RPS2P15880 293 aaKnown RBP11.74□□□□□ -0.53
VPS25-201ENST00000253794 MGMTP16455 207 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 SERPINA2P20848 420 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 SERPINB10P48595 397 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 CAV3P56539 151 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 RPS27AP62979 156 aaKnown RBP11.74□□□□□ -0.53
VPS25-201ENST00000253794 MXD1Q05195 221 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 DYNC1I2Q13409 638 aaKnown RBP11.74□□□□□ -0.53
VPS25-201ENST00000253794 MPV17LQ2QL34 196 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 HES5Q5TA89 166 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 BATF2Q8N1L9 274 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 OR51D1Q8NGF3 324 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 OR5T2Q8NGG2 359 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 OR8B3Q8NGG8 313 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 OR8B2Q96RD0 313 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 CCL13Q99616 98 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 TMUB1Q9BVT8 246 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 DCSTAMPQ9H295 470 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 LIN7BQ9HAP6 207 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 NDUFA13Q9P0J0 144 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 RCC2Q9P258 522 aaKnown RBP11.74□□□□□ -0.53
VPS25-201ENST00000253794 GLS2Q9UI32 602 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 ST3GAL6Q9Y274 331 aa11.74□□□□□ -0.53
VPS25-201ENST00000253794 H7C1Q1 480 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 SH2D1BO14796 132 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 TMPRSS2O15393 492 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 SLC2A2P11168 524 aaPredicted RBP11.73□□□□□ -0.53
VPS25-201ENST00000253794 FOSL1P15407 271 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 RAB6AP20340 208 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 IL2RGP31785 369 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 PITPNBP48739 271 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 CLDN12P56749 244 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 PAX5Q02548 391 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 SPCS2Q15005 226 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 P2RY14Q15391 338 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 TMEM249Q2WGJ8 235 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 C2orf76Q3KRA6 126 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 CIARTQ8N365 385 aaPredicted RBP11.73□□□□□ -0.53
VPS25-201ENST00000253794 FAM89BQ8N5H3 189 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms