RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 RANGRFQ9HD47 186 aaPredicted RBP15.44■□□□□ 0.06
VIM-201ENST00000224237 ZNF581Q9P0T4 197 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 AK3Q9UIJ7 227 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 A0A1B0GWJ7 208 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 ATP6V1G2-DDX39BF2Z307 99 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 CCL21O00585 134 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 PRKACAP17612 351 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 AMY2BP19961 511 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 DAZAP2Q15038 168 aaPredicted RBP15.44■□□□□ 0.06
VIM-201ENST00000224237 BEST4Q8NFU0 473 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 SLC6A7Q99884 636 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 CMSS1Q9BQ75 279 aaKnown RBP15.44■□□□□ 0.06
VIM-201ENST00000224237 ST6GALNAC5Q9BVH7 336 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 CXXC4Q9H2H0 198 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 ZNF701Q9NV72 531 aaPredicted RBP15.44■□□□□ 0.06
VIM-201ENST00000224237 ING3Q9NXR8 418 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 ADGRG4Q8IZF6 3080 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 A0A1B0GUH1 482 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 RHBDL1O75783 438 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 IFNA6P05013 189 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 CSN2P05814 226 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 DTYMKP23919 212 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 SNU13P55769 128 aaKnown RBP15.43■□□□□ 0.06
VIM-201ENST00000224237 TAS2R46P59540 309 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 MZT1Q08AG7 82 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 IL13RA2Q14627 380 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 NKPD1Q17RQ9 610 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 MICBQ29980 383 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 SCGB2B2Q4G0G5 96 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 VAX1Q5SQQ9 334 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 NOXA1Q86UR1 476 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 WFDC8Q8IUA0 241 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 FAM58AQ8N1B3 248 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 TRAF4Q9BUZ4 470 aaPredicted RBP15.43■□□□□ 0.06
VIM-201ENST00000224237 EDARQ9UNE0 448 aa15.43■□□□□ 0.06
VIM-201ENST00000224237 A8MV72 311 aaPredicted RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 PYCARD-AS1I3L0S3 204 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 IGHV3-13P01766 116 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 PMP2P02689 132 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 CHRNB4P30926 498 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 KLF3P57682 345 aaPredicted RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 CD83Q01151 205 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 METTL11BQ5VVY1 283 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 Q6ZR03 302 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 TMEM171Q8WVE6 324 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 DACT3Q96B18 629 aaPredicted RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 ZNF488Q96MN9 340 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 FYTTD1Q96QD9 318 aaKnown RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 HS3ST6Q96QI5 342 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 CHST6Q9GZX3 395 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 ZNF442Q9H7R0 627 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 MSL2Q9HCI7 577 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 COQ3Q9NZJ6 369 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 RCC2Q9P258 522 aaKnown RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 ZNF230Q9UIE0 474 aaPredicted RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 DUSP13Q9UII6 198 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 CDIPTO14735 213 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 GRPP07492 148 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 PDCD1Q15116 288 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 MSMPQ1L6U9 139 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 ARRDC1Q8N5I2 433 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 NUP37Q8NFH4 326 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 OR5H2Q8NGV7 314 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 DMRTB1Q96MA1 342 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 HDHD3Q9BSH5 251 aaPredicted RBP15.42■□□□□ 0.06
VIM-201ENST00000224237 BEX2Q9BXY8 128 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 OR51J1Q9H342 316 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 BEX1Q9HBH7 125 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 SPACA1Q9HBV2 294 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 IL36RNQ9UBH0 155 aa15.42■□□□□ 0.06
VIM-201ENST00000224237 IGLV3-9A0A075B6K5 115 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 F5H5P2 479 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 IL5P05113 134 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 THBDP07204 575 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 ACAA1P09110 424 aaPredicted RBP15.41■□□□□ 0.06
VIM-201ENST00000224237 PGA5P0DJD9 388 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 ANXA7P20073 488 aaKnown RBP15.41■□□□□ 0.06
VIM-201ENST00000224237 IKZF1Q13422 519 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 VHLLQ6RSH7 139 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 GLDNQ6ZMI3 551 aaPredicted RBP15.41■□□□□ 0.06
VIM-201ENST00000224237 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
VIM-201ENST00000224237 OR13C8Q8NGS7 320 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 MED30Q96HR3 178 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 MED28Q9H204 178 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 NGBQ9NPG2 151 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 IGSF10Q6WRI0 2623 aa15.41■□□□□ 0.06
VIM-201ENST00000224237 FAM172BPA6NC97 362 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 ATXN7O15265 892 aaPredicted RBP15.4■□□□□ 0.06
VIM-201ENST00000224237 RLN1P04808 185 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 ERVK11-1P61568 191 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 MAB21L1Q13394 359 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 ST3GAL2Q16842 350 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 FBXL19-AS1Q494R0 122 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 BRICD5Q6PL45 260 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 LRP11Q86VZ4 500 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 OR5AP2Q8NGF4 316 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 CAPSLQ8WWF8 208 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 TLNRD1Q9H1K6 362 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 GPN1Q9HCN4 374 aaPredicted RBP15.4■□□□□ 0.06
VIM-201ENST00000224237 C12orf4Q9NQ89 552 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms