RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 FBXL14Q8N1E6 418 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 NUP37Q8NFH4 326 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 OR5H2Q8NGV7 314 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 OR4K15Q8NH41 348 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 NUDCD2Q8WVJ2 157 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 HPS1Q92902 700 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 EMG1Q92979 244 aaKnown RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 FAHD2AQ96GK7 314 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 CMSS1Q9BQ75 279 aaKnown RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 MED28Q9H204 178 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 POFUT1Q9H488 388 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 TREM2Q9NZC2 230 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 TINAGQ9UJW2 476 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 KCNK7Q9Y2U2 307 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 LOC400499M0QZD8 3231 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 FRYQ5TBA9 3013 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 TRAV6A0A075B6T7 132 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 TRGV8A0A0C4DH27 118 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 A0A1W2PP11 408 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 A0A1W2PR80 420 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 AGFG2O95081 481 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 IGHV3-13P01766 116 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 PTHLHP12272 177 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 CHRNB4P30926 498 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 KLF3P57682 345 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 MAB21L1Q13394 359 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 SURF2Q15527 256 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 TAF9Q16594 264 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 SPIN3Q5JUX0 258 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 SPATA46Q5T0L3 261 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 SHEQ5VZ18 495 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 HAGHLQ6PII5 290 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 GLDNQ6ZMI3 551 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 IDO2Q6ZQW0 420 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 RNF144BQ7Z419 303 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 MYPOPQ86VE0 399 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 CALHM1Q8IU99 346 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 TCTE3Q8IZS6 198 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 FAM58AQ8N1B3 248 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 RPRMLQ8N4K4 120 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 BHLHE23Q8NDY6 225 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 BEST4Q8NFU0 473 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 OR51S1Q8NGJ8 323 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 GIMAP1Q8WWP7 306 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 RADILQ96JH8 1075 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 DIRC2Q96SL1 478 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 DHRS9Q9BPW9 319 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 TLNRD1Q9H1K6 362 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 OR51B6Q9H340 312 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 OR51J1Q9H342 316 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 GHITMQ9H3K2 345 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF442Q9H7R0 627 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 ZMAT3Q9HA38 289 aaKnown RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 SEBOXQ9HB31 216 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF286AQ9HBT8 521 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 C12orf4Q9NQ89 552 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 RCC2Q9P258 522 aaKnown RBP8.31□□□□□ -1.08
PHGDH-215ENST00000641371 ZFHX4Q86UP3 3567 aa8.31□□□□□ -1.08
PHGDH-215ENST00000641371 TPRP12270 2363 aaKnown RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 IGLV3-9A0A075B6K5 115 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 PLSCR5A0PG75 271 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 WIPF3A6NGB9 483 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 MCRIP1C9JLW8 97 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 ARPC1BO15143 372 aaKnown RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 SSX5O60225 188 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 OR7C1O76099 320 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 PLATP00750 562 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 SFTPBP07988 381 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 CTXN2P0C2S0 81 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 PGA5P0DJD9 388 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 TNFSF4P23510 183 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 CD40P25942 277 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 CD200P41217 278 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 KCNJ3P48549 501 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF83P51522 516 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 SNU13P55769 128 aaKnown RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 ARPC4P59998 168 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 NKX6-1P78426 367 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 SORDQ00796 357 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 CHRFAM7AQ494W8 412 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 NKAPLQ5M9Q1 402 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 MOB1BQ7L9L4 216 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 FAM90A1Q86YD7 464 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 RELL2Q8NC24 303 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 OR10AD1Q8NGE0 317 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 OR5AP2Q8NGF4 316 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 OR10Z1Q8NGY1 313 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 OR6F1Q8NGZ6 308 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 FBXW5Q969U6 566 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 ERGIC1Q969X5 290 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 SLAMF9Q96A28 289 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 DACT3Q96B18 629 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 CCDC120Q96HB5 630 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 RASL12Q9NYN1 266 aa8.3□□□□□ -1.08
PHGDH-215ENST00000641371 RALYQ9UKM9 306 aaKnown RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 RP1L1Q8IWN7 2480 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-215ENST00000641371 TLN1Q9Y490 2541 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms