RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 HSF4Q9ULV5 492 aa15.04■□□□□ -0
SHKBP1-224ENST00000600718 MEIS3P1A6NDR6 274 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 SERPINE3A8MV23 424 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 MLNRO43193 412 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 SYNGR1O43759 233 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 CA11O75493 328 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 FAUP35544 74 aaKnown RBP15.03■□□□□ -0
SHKBP1-224ENST00000600718 RBM11P57052 281 aaKnown RBP15.03■□□□□ -0
SHKBP1-224ENST00000600718 FGF12P61328 243 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 PLA1AQ53H76 456 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 OLFML2AQ68BL7 652 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 WDR86Q86TI4 376 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 TMEM229BQ8NBD8 167 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 PRR7Q8TB68 274 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 TRAF4Q9BUZ4 470 aaPredicted RBP15.03■□□□□ -0
SHKBP1-224ENST00000600718 POLDIP2Q9Y2S7 368 aa15.03■□□□□ -0
SHKBP1-224ENST00000600718 IGLV3-9A0A075B6K5 115 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 NKX2-6A6NCS4 301 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A10PA6NDY2 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A18PA6NE21 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A16PA6NEW6 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A20PA6NIJ5 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A8PA6NJQ4 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A7PA6NKC0 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A22PA8MWA6 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A12PA8MX19 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A5PA8MXJ8 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A23PA8MXZ1 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 CRYZL1O95825 349 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 MT-ND4P03905 459 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A15PP0C7V4 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A13PP0C7W8 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A14PP0C7W9 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 FAM90A24PP0C7X0 464 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 BTCP35070 178 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 BSPH1Q075Z2 132 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 PIGYQ3MUY2 71 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 Q5BKY6 102 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 NHLRC3Q5JS37 347 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 VHLLQ6RSH7 139 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 LRP11Q86VZ4 500 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 SCCPDHQ8NBX0 429 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 ZFAND1Q8TCF1 268 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 MMP28Q9H239 520 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 DPAGT1Q9H3H5 408 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 PLK3Q9H4B4 646 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 PLEKHJ1Q9NW61 149 aa15.02■□□□□ -0
SHKBP1-224ENST00000600718 ABCD4O14678 606 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 GEMIN2O14893 280 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 SSX5O60225 188 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 CBX5P45973 191 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 TAS2R19P59542 299 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 SORDQ00796 357 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 ST3GAL2Q16842 350 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 SMUG1Q53HV7 270 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 RTN4RL2Q86UN3 420 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 NUDCD2Q8WVJ2 157 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 ST8SIA4Q92187 359 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 FYTTD1Q96QD9 318 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 CACNG6Q9BXT2 260 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 ESRP2Q9H6T0 727 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 MSL2Q9HCI7 577 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 COPZ2Q9P299 210 aa15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 TMA7Q9Y2S6 64 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-224ENST00000600718 POLEQ07864 2286 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 ACAA1P09110 424 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 AKAIN1P0CW23 69 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF154Q13106 437 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 ARFRP1Q13795 201 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 IGFBP7Q16270 282 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 C4orf17Q53FE4 359 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 SLC22A25Q6T423 547 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 OR10AD1Q8NGE0 317 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 SUN5Q8TC36 379 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 CNTNAP3BQ96NU0 1288 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 CNTNAP3Q9BZ76 1288 aa15.01□□□□□ -0.01
SHKBP1-224ENST00000600718 GRPP07492 148 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 GIFP27352 417 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 CHATP28329 748 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 C6orf201Q7Z4U5 140 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 GLCCI1Q86VQ1 547 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 Q8IYB0 196 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 MRPL24Q96A35 216 aaKnown RBP15□□□□□ -0.01
SHKBP1-224ENST00000600718 SYT3Q9BQG1 590 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 OCSTAMPQ9BR26 566 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 MARVELD1Q9BSK0 173 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF442Q9H7R0 627 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 IFT46Q9NQC8 304 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 CA10Q9NS85 328 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 ATP23Q9Y6H3 246 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 F5H5P2 479 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 F8VVB4 439 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 F8VWA3 439 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 H3BUI4 141 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 RHBDL1O75783 438 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 GNLYP22749 145 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 NKAPLQ5M9Q1 402 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 NCMAPQ5T1S8 102 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 STEAP1BQ6NZ63 245 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 LINC00596Q86U02 117 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms