RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 BANF2Q9H503 90 aa14.1□□□□□ -0.15
CDK5RAP3-215ENST00000579780 HMG20AQ9NP66 347 aa14.1□□□□□ -0.15
CDK5RAP3-215ENST00000579780 RASL12Q9NYN1 266 aa14.1□□□□□ -0.15
CDK5RAP3-215ENST00000579780 RNF7Q9UBF6 113 aa14.1□□□□□ -0.15
CDK5RAP3-215ENST00000579780 PPP1R3CQ9UQK1 317 aa14.1□□□□□ -0.15
CDK5RAP3-215ENST00000579780 DYSFO75923 2080 aa14.1□□□□□ -0.15
CDK5RAP3-215ENST00000579780 LRRC30A6NM36 301 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 F8VVB4 439 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 F8VWA3 439 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 OVOL3O00110 214 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 NXPH2O95156 264 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 HPXP02790 462 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 IRF2P14316 349 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 TNFSF8P32971 234 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 SPIN3Q5JUX0 258 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 RAB12Q6IQ22 244 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 BAIAP2L2Q6UXY1 529 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 FAM90A1Q86YD7 464 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 C1orf87Q8N0U7 546 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 FAM58AQ8N1B3 248 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 GCSAMQ8N6F7 178 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 S100ZQ8WXG8 99 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 DIRAS2Q96HU8 199 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 TSC22D3Q99576 134 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 CCL19Q99731 98 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 SELENOIQ9C0D9 397 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 AKIP1Q9NQ31 210 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 RABL2AQ9UBK7 228 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 EXTL2Q9UBQ6 330 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 RABL2BQ9UNT1 228 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 GCN1Q92616 2671 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 DCHS2Q6V1P9 2916 aa14.09□□□□□ -0.15
CDK5RAP3-215ENST00000579780 IGHV1-69-2A0A0G2JMI3 117 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 TPPPO94811 219 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 LHBP01229 141 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 CHRM2P08172 466 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PRKACAP17612 351 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 EGR1P18146 543 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 GLRA1P23415 457 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 MNDAP41218 407 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 NR4A2P43354 598 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 MPV17LQ2QL34 196 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PIGYQ3MUY2 71 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 SPANXN2Q5MJ10 180 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 METAP1DQ6UB28 335 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 ACP7Q6ZNF0 438 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 BIVMQ86UB2 503 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 FAM89BQ8N5H3 189 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 OR4M1Q8NGD0 313 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 OR56B1Q8NGI3 324 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PHF21AQ96BD5 680 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 S100A16Q96FQ6 103 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 CXorf56Q9H5V9 222 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 TMEM106BQ9NUM4 274 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 ST3GAL6Q9Y274 331 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PLEKHA6Q9Y2H5 1048 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 V9GYH0 126 aa14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 UTP20O75691 2785 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-215ENST00000579780 A0A0A6YYD4 124 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 FOXI3A8MTJ6 420 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 RAB27BO00194 218 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 KNG1P01042 644 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 CDK2P24941 298 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PTBP1P26599 531 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 CDKN1AP38936 164 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 TMEM69Q5SWH9 247 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 BATF2Q8N1L9 274 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 MFSD4AQ8N468 514 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 NICN1Q9BSH3 213 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 ATG5Q9H1Y0 275 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 DIABLOQ9NR28 239 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 DLL4Q9NR61 685 aa14.07□□□□□ -0.16
CDK5RAP3-215ENST00000579780 H3BUI4 141 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 XRCC3O43542 346 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 CYB5R3P00387 301 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 INHBBP09529 407 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 VEGFCP49767 419 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 ZNF45Q02386 682 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 ZNF146Q15072 292 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 TAF9Q16594 264 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 HFEQ30201 348 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 OR10R2Q8NGX6 335 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 RDH5Q92781 318 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 GAL3ST1Q99999 423 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 SOSTQ9BQB4 213 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 WDR12Q9GZL7 423 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 WDR13Q9H1Z4 485 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 IFT22Q9H7X7 185 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 RCC2Q9P258 522 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 IL36RNQ9UBH0 155 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PTPN13Q12923 2485 aa14.06□□□□□ -0.16
CDK5RAP3-215ENST00000579780 CLDN25C9JDP6 229 aa14.05□□□□□ -0.16
CDK5RAP3-215ENST00000579780 TMEM178BH3BS89 294 aa14.05□□□□□ -0.16
CDK5RAP3-215ENST00000579780 GEMIN2O14893 280 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-215ENST00000579780 WNT9BO14905 357 aa14.05□□□□□ -0.16
CDK5RAP3-215ENST00000579780 RP2O75695 350 aa14.05□□□□□ -0.16
CDK5RAP3-215ENST00000579780 GABRR1P24046 479 aa14.05□□□□□ -0.16
CDK5RAP3-215ENST00000579780 PITPNBP48739 271 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms