RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PITPNBP48739 271 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-225ENST00000569245 ZNF154Q13106 437 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 KRTAP24-1Q3LI83 254 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 BTNL3Q6UXE8 466 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 DCDC5Q6ZRR9 648 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 CROCCP3Q8IVE0 287 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 NKAIN3Q8N8D7 197 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 OR13C9Q8NGT0 318 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-225ENST00000569245 PIGCQ92535 297 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 TECTBQ96PL2 329 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 HIST1H2AAQ96QV6 131 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 GFI1Q99684 422 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 DCUN1D5Q9BTE7 237 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 PPP1R3EQ9H7J1 279 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 TMEM138Q9NPI0 162 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 PTTG2Q9NZH5 202 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 CLN8Q9UBY8 286 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 OPN4Q9UHM6 478 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 POLR3KQ9Y2Y1 108 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-225ENST00000569245 INSIG2Q9Y5U4 225 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 AUP1Q9Y679 476 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 IGKV1-9A0A0C4DH69 117 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 OOEPA6NGQ2 149 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 NOTOA8MTQ0 251 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 A8MXK9 166 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 TMEM127O75204 238 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 NRASP01111 189 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 MAS1P04201 325 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 CFPP27918 469 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 BDKRB2P30411 391 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 RORCP51449 518 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 PRDX4Q13162 271 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 UBE2V2Q15819 145 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 DGUOKQ16854 277 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 NR2C2APQ86WQ0 139 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 LYPD6Q86Y78 171 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 CDH26Q8IXH8 852 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 OR51A2Q8NGJ7 313 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 FOXRED1Q96CU9 486 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-225ENST00000569245 C19orf24Q9BVV8 132 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 RTL8AQ9BWD3 113 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 ABCB9Q9NP78 766 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 AK6Q9Y3D8 172 aaKnown RBP12.07□□□□□ -0.48
COMMD4-225ENST00000569245 MPC1Q9Y5U8 109 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 V9GY05 133 aa12.07□□□□□ -0.48
COMMD4-225ENST00000569245 ADAM20O43506 726 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 GYPAP02724 150 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 FPR2P25090 351 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 SOX6P35712 828 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 OR10A3P58181 314 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 CNN3Q15417 329 aaKnown RBP12.06□□□□□ -0.48
COMMD4-225ENST00000569245 GLT8D1Q68CQ7 371 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 DNAAF1Q8NEP3 725 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 LRRC29Q8WV35 223 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 RAB40AQ8WXH6 277 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 SPSB1Q96BD6 273 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 RNF170Q96K19 258 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 BARHL1Q9BZE3 327 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 SLIRPQ9GZT3 109 aaKnown RBP12.06□□□□□ -0.48
COMMD4-225ENST00000569245 NXF2Q9GZY0 626 aaKnown RBP12.06□□□□□ -0.48
COMMD4-225ENST00000569245 NEK6Q9HC98 313 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 GPR173Q9NS66 373 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 A3GALT2U3KPV4 340 aa12.06□□□□□ -0.48
COMMD4-225ENST00000569245 STAB1Q9NY15 2570 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 A0A0A6YYJ9 748 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 CDIPTO14735 213 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 NDUFA2O43678 99 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 PRKACBP22694 351 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 AZGP1P25311 298 aaKnown RBP12.05□□□□□ -0.48
COMMD4-225ENST00000569245 CAV3P56539 151 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 MICBQ29980 383 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 WDR25Q64LD2 544 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-225ENST00000569245 MOB3CQ70IA8 216 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 WDR86Q86TI4 376 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 OR5P3Q8WZ94 311 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 KCTD12Q96CX2 325 aaKnown RBP12.05□□□□□ -0.48
COMMD4-225ENST00000569245 ITPKCQ96DU7 683 aa12.05□□□□□ -0.48
COMMD4-225ENST00000569245 A0A075B6Q4 140 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 IGHV2-70DA0A0C4DH43 119 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 SMIM30A4D0T7 59 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 IFITM5A6NNB3 132 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 AIPO00170 330 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 MAGEB3O15480 346 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 LHBP01229 141 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 EGR1P18146 543 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 NPY4RP50391 375 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 FUT6P51993 359 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms