RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TMEM17Q86X19 198 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 SEC22AQ96IW7 307 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 PHB2Q99623 299 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 PRR13Q9NZ81 148 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 CACNA1GO43497 2377 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 KLK10O43240 276 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 DUS4LO95620 317 aaKnown RBP16.4■□□□□ 0.22
SMPD3-203ENST00000563226 IL32P24001 234 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 IDH3GP51553 393 aaPredicted RBP16.4■□□□□ 0.22
SMPD3-203ENST00000563226 TAS2R31P59538 309 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 GABRA6Q16445 453 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 ACSF3Q4G176 576 aaPredicted RBP16.4■□□□□ 0.22
SMPD3-203ENST00000563226 MICU1Q9BPX6 476 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 OPA3Q9H6K4 179 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 IL36RNQ9UBH0 155 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 ANXA10Q9UJ72 324 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 DSPP15924 2871 aaKnown RBP16.4■□□□□ 0.22
SMPD3-203ENST00000563226 GTF3C1Q12789 2109 aa16.4■□□□□ 0.22
SMPD3-203ENST00000563226 HMSDA8MTL9 139 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 M0R233 179 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 PDCD6O75340 191 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 OR7C1O76099 320 aaPredicted RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 GLRA1P23415 457 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 ARPC4P59998 168 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 UBE2NP61088 152 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 SUPT4H1P63272 117 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 TBC1D28Q2M2D7 210 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 TMEM128Q5BJH2 165 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 Q6ZT83 130 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 TMEM185AQ8NFB2 350 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 Q8NFD4 153 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 MARS2Q96GW9 593 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 CCDC120Q96HB5 630 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 LIME1Q9H400 295 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 MTCH1Q9NZJ7 389 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 DCHS1Q96JQ0 3298 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 K7EM74 188 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 RRP8O43159 456 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 SYNGR1O43759 233 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF205O95201 554 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 CD8AP01732 235 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 S100A1P23297 94 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 DTYMKP23919 212 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 TGFBR3Q03167 851 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 SRSF4Q08170 494 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 EXOSC2Q13868 293 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 SLC9A3R2Q15599 337 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 C6orf183Q5T699 404 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 ASB13Q8WXK3 278 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 OR5P3Q8WZ94 311 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 WNT2BQ93097 391 aa16.39■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF2Q9BSG1 426 aaPredicted RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 INTS1Q8N201 2190 aaKnown RBP16.39■□□□□ 0.21
SMPD3-203ENST00000563226 RFPL4AA6NLU0 287 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 DBX1A6NMT0 343 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 C3orf80F5H4A9 247 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 RFPL4AL1F8VTS6 287 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 HLA-GP17693 338 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 ERVS71-1P61550 626 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 LPCAT3Q6P1A2 487 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF585AQ6P3V2 769 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 CLEC18BQ6UXF7 455 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 OR5A2Q8NGI9 324 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 PDCD10Q9BUL8 212 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 CLEC4MQ9H2X3 399 aaPredicted RBP16.38■□□□□ 0.21
SMPD3-203ENST00000563226 PCDHB16Q9NRJ7 776 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 DKK4Q9UBT3 224 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 PRR14LQ5THK1 2151 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 ANKRD30BLA7E2S9 258 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 SMPD2O60906 423 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF660Q6AZW8 331 aaPredicted RBP16.38■□□□□ 0.21
SMPD3-203ENST00000563226 IGFL3Q6UXB1 125 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 C1QTNF6Q9BXI9 259 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 EDARQ9UNE0 448 aa16.38■□□□□ 0.21
SMPD3-203ENST00000563226 SFT2D2O95562 160 aa16.37■□□□□ 0.21
SMPD3-203ENST00000563226 RPS2P15880 293 aaKnown RBP16.37■□□□□ 0.21
SMPD3-203ENST00000563226 CA6P23280 308 aa16.37■□□□□ 0.21
SMPD3-203ENST00000563226 LRRC37A5PQ49AS3 106 aa16.37■□□□□ 0.21
SMPD3-203ENST00000563226 HAGHLQ6PII5 290 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-203ENST00000563226 SAXO1Q8IYX7 474 aa16.37■□□□□ 0.21
SMPD3-203ENST00000563226 OR5L1Q8NGL2 311 aa16.37■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF488Q96MN9 340 aa16.37■□□□□ 0.21
SMPD3-203ENST00000563226 OR5H8P0DN80 308 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 COX5AP20674 150 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 FUT3P21217 361 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 FGF12P61328 243 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 ELP2Q6IA86 826 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 TMUB2Q71RG4 321 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 OR6K3Q8NGY3 331 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 PCNPQ8WW12 178 aaKnown RBP16.36■□□□□ 0.21
SMPD3-203ENST00000563226 HIST1H2AAQ96QV6 131 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 OR2J1Q9GZK6 312 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF442Q9H7R0 627 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 LUZP4Q9P127 313 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 AGFG2O95081 481 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 PGAM2P15259 253 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 ANKRD55Q3KP44 614 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 SLC22A25Q6T423 547 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 SEM1Q6ZVN7 128 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms