RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 HAGHLQ6PII5 290 aaPredicted RBP11.78□□□□□ -0.52
TPM1-215ENST00000558868 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 LRRC46Q96FV0 321 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 FGF23Q9GZV9 251 aaPredicted RBP11.78□□□□□ -0.52
TPM1-215ENST00000558868 C20orf85Q9H1P6 137 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 NGBQ9NPG2 151 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 ELF5Q9UKW6 265 aaPredicted RBP11.78□□□□□ -0.52
TPM1-215ENST00000558868 KCNK7Q9Y2U2 307 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 ALG5Q9Y673 324 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 ZGRF1Q86YA3 2104 aa11.77□□□□□ -0.52
TPM1-215ENST00000558868 TRAV6A0A075B6T7 132 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 SSX5O60225 188 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 LILRA1O75019 489 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 PDCD6O75340 191 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 PEX14O75381 377 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 SFTPBP07988 381 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 BCL3P20749 454 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 PTAFRP25105 342 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 ASCL1P50553 236 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 FABP6P51161 128 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 SELENOVP59797 346 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 MPV17LQ2QL34 196 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 FAM76BQ5HYJ3 339 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 ALKBH2Q6NS38 261 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 OR13G1Q8NGZ3 307 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 PRRT1Q99946 306 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 SLC25A21Q9BQT8 299 aaPredicted RBP11.77□□□□□ -0.53
TPM1-215ENST00000558868 CHST6Q9GZX3 395 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 SPACA1Q9HBV2 294 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 COQ3Q9NZJ6 369 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 EDARQ9UNE0 448 aa11.77□□□□□ -0.53
TPM1-215ENST00000558868 CCL21O00585 134 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 C1QL1O75973 258 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 AMY2AP04746 511 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 IFNA6P05013 189 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 ACAA1P09110 424 aaPredicted RBP11.76□□□□□ -0.53
TPM1-215ENST00000558868 ZNF250P15622 560 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 FUT3P21217 361 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 DTYMKP23919 212 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 CD40P25942 277 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 CHATP28329 748 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 CHRNB4P30926 498 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 RAB25P57735 213 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 TAS2R46P59540 309 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 IL13RA2Q14627 380 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 PIGYQ3MUY2 71 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 HOGA1Q86XE5 327 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 BPIFB2Q8N4F0 458 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 OR4K15Q8NH41 348 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 HPS1Q92902 700 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 EMG1Q92979 244 aaKnown RBP11.76□□□□□ -0.53
TPM1-215ENST00000558868 DVL3Q92997 716 aaPredicted RBP11.76□□□□□ -0.53
TPM1-215ENST00000558868 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
TPM1-215ENST00000558868 SLC2A8Q9NY64 477 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 MTCH1Q9NZJ7 389 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 OSGIN2Q9Y236 505 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 PTPN13Q12923 2485 aa11.76□□□□□ -0.53
TPM1-215ENST00000558868 A0A1B0GWJ7 208 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 GEMIN2O14893 280 aaKnown RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 CCNKO75909 580 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 IGHV3-13P01766 116 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 GLAP06280 429 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 AMY2BP19961 511 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 CCKARP32238 428 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 NPBWR2P48146 333 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 KLF3P57682 345 aaPredicted RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 NKX6-1P78426 367 aaPredicted RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 CARTPTQ16568 116 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 VAX1Q5SQQ9 334 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 METTL11BQ5VVY1 283 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 FAAP20Q6NZ36 180 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 NCCRP1Q6ZVX7 275 aaPredicted RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 C6orf201Q7Z4U5 140 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 TMEM17Q86X19 198 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 FAM58AQ8N1B3 248 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 GVQW1Q8N7I0 195 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 NUP37Q8NFH4 326 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 OR10AD1Q8NGE0 317 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 OR51S1Q8NGJ8 323 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 MED30Q96HR3 178 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 GINS4Q9BRT9 223 aa11.75□□□□□ -0.53
TPM1-215ENST00000558868 GPN1Q9HCN4 374 aaPredicted RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 PRRC2CQ9Y520 2896 aaKnown RBP11.75□□□□□ -0.53
TPM1-215ENST00000558868 A0A0B4J293 547 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 A0A1B0GUH1 482 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 VSTM5A8MXK1 200 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 M0QYG6 137 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 HAX1O00165 279 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
TPM1-215ENST00000558868 SYNGR1O43759 233 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 OR7C1O76099 320 aaPredicted RBP11.74□□□□□ -0.53
TPM1-215ENST00000558868 IL5P05113 134 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 FCER2P06734 321 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms