RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 OR2I1PQ8NGU4 316 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 DPF1Q92782 380 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 GAL3ST3Q96A11 431 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 TMEM106AQ96A25 262 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 TM4SF19Q96DZ7 209 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 SLC35A4Q96G79 324 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 GAL3ST4Q96RP7 486 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 NSG2Q9Y328 171 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 RHBDD3Q9Y3P4 386 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 MMP24Q9Y5R2 645 aa4.63□□□□□ -1.67
USP28-213ENST00000544967 CACNA1HO95180 2353 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 EEF1E1-BLOC1S5C9J1V9 151 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 HSD17B6O14756 317 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 GPR137BO60478 399 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MMP23AO75900 390 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 HBE1P02100 147 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MBPP02686 304 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 TRGC1P0CF51 173 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 HIST1H1CP16403 213 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 AK4P27144 223 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 RPL12P30050 165 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 ALDH3B1P43353 468 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 RAB28P51157 221 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 IDH3GP51553 393 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 ROM1Q03395 351 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 RTL6Q6ICC9 239 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MEX3DQ86XN8 651 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 LILRA3Q8N6C8 439 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 COX18Q8N8Q8 333 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 FAM46BQ96A09 425 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 DAZAP1Q96EP5 407 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 CNRIP1Q96F85 164 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 TGM7Q96PF1 710 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 SDF2Q99470 211 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 SYT3Q9BQG1 590 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 CCDC3Q9BQI4 270 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 WDR76Q9H967 626 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 Q9N2J8 555 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MMP25Q9NPA2 562 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 IKZF2Q9UKS7 526 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 NTNG1Q9Y2I2 539 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 WDFY3Q8IZQ1 3526 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 FER1L5A0AVI2 2057 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 IGKV1-8A0A0C4DH67 115 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 M0QYG6 137 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ETV2O00321 342 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 CYB5R3P00387 301 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 ARG1P05089 322 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 SRP19P09132 144 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 SLC35G4P0C7Q5 338 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 RD3LP0DJH9 198 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ZNF708P17019 499 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ZNF25P17030 456 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 ZNF10P21506 573 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 HHEXQ03014 270 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 IL13RA2Q14627 380 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 DEFB133Q30KQ1 61 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 LEG1Q6P5S2 330 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ZNF550Q7Z398 422 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 CENPVQ7Z7K6 275 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 LRTM2Q8N967 370 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 OR2D3Q8NGH3 330 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 OR9A2Q8NGT5 310 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 OR1P1Q8NH06 330 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ZNF563Q8TA94 476 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MRGPRDQ8TDS7 321 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 SLC25A43Q8WUT9 341 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 EMG1Q92979 244 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 TMEM18Q96B42 140 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 FGGYQ96C11 551 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 FAM210BQ96KR6 192 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ALG12Q9BV10 488 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 TBL1XR1Q9BZK7 514 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 SEPSECSQ9HD40 501 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 MKKSQ9NPJ1 570 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 C1orf123Q9NWV4 160 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 FBXL17Q9UF56 701 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 TMED7Q9Y3B3 224 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 KCNE3Q9Y6H6 103 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 KMT2BQ9UMN6 2715 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 LOC100509620A0A075B734 347 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 A0A087WZY1 265 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 H3BQ15 152 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 CLDN34H7C241 214 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 PEX12O00623 359 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 DUX1O43812 170 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 AMBPP02760 352 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 PPBPP02775 128 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 FABP4P15090 132 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ALOX5APP20292 161 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 HIST1H1TP22492 207 aaPredicted RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 SSR2P43308 183 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MTCP1P56278 107 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 MRPL49Q13405 166 aaKnown RBP4.62□□□□□ -1.67
USP28-213ENST00000544967 IL11RAQ14626 422 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 ARL6IP1Q15041 203 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 HYAL4Q2M3T9 481 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 SCGB2B2Q4G0G5 96 aa4.62□□□□□ -1.67
USP28-213ENST00000544967 TMEM225Q6GV28 225 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms