RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SEH1LQ96EE3 360 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 SDSLQ96GA7 329 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 POM121Q96HA1 1249 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 DMRTB1Q96MA1 342 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF488Q96MN9 340 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 GAFA1Q96PS6 74 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 SPACA5Q96QH8 159 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR14A2Q96R54 314 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 JMJD8Q96S16 334 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMED9Q9BVK6 235 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 SUCNR1Q9BXA5 334 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMPRSS13Q9BYE2 586 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 YTHDF1Q9BYJ9 559 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM234AQ9H0X4 552 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUSP21Q9H596 190 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 OCEL1Q9H607 264 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TCF7L1Q9HCS4 588 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 VCX3AQ9NNX9 186 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 EXOSC4Q9NPD3 245 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ONECUT1Q9UBC0 465 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 CTSZQ9UBR2 303 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RPUSD1Q9UJJ7 312 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 MED13LQ71F56 2210 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 IGKV1-27A0A075B6S5 117 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRBV5-5A0A0J9YX44 114 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 FUOMA2VDF0 154 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MEGF11A6BM72 1044 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 C22orf46C9J442 243 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 DENRO43583 198 aaKnown RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 SPRY1O43609 319 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 TCF21O43680 179 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ANGPTL7O43827 346 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF780AO75290 641 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ARL6IP5O75915 188 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 RGS9O75916 674 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 KDM4BO94953 1096 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 HAND1O96004 215 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 LALBAP00709 142 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ALDOBP05062 364 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF44P15621 663 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ADRA2CP18825 462 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 BCL3P20749 454 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 GABRR1P24046 479 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF93P35789 620 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 TGFBR2P37173 567 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MTNR1BP49286 362 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 SNU13P55769 128 aaKnown RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 EDDM3BP56851 147 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 BPIFB3P59826 476 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 FGF12P61328 243 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ERVK11-1P61568 191 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 COL10A1Q03692 680 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 PAX8Q06710 450 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MLLT11Q13015 90 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 DOC2BQ14184 412 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 GPR176Q14439 515 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 IRF3Q14653 427 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 DGUOKQ16854 277 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ACSM3Q53FZ2 586 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 HSD17B12Q53GQ0 312 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 LIPKQ5VXJ0 399 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF841Q6ZN19 808 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 JAGN1Q8N5M9 183 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 KIR3DL3Q8N743 410 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 CHST4Q8NCG5 386 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF485Q8NCK3 441 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNRF1Q8ND25 227 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 PXT1Q8NFP0 134 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR5D13Q8NGL4 314 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR13C5Q8NGS8 318 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 RGP1Q92546 391 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 PGLYRP3Q96LB9 341 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 WDFY2Q96P53 400 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 DERL3Q96Q80 235 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR5M11Q96RB7 305 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MGLLQ99685 303 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 PCGF1Q9BSM1 259 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 DCTN5Q9BTE1 182 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MS4A7Q9GZW8 240 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 METTL9Q9H1A3 318 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 CNTD2Q9H8S5 307 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 HES4Q9HCC6 221 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ISYNA1Q9NPH2 558 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MMP26Q9NRE1 261 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 RBFOX1Q9NWB1 397 aaKnown RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 MTCH1Q9NZJ7 389 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF222Q9UK12 451 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 NUP50Q9UKX7 468 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 FOXJ3Q9UPW0 622 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 GSTK1Q9Y2Q3 226 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 LSM2Q9Y333 95 aaKnown RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 KPTNQ9Y664 436 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 SIRT4Q9Y6E7 314 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 DYSFO75923 2080 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 CR1P17927 2039 aa4.48□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRBV5-7A0A0A0MS05 114 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A0A6YYJ9 748 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRAV40A0A0B4J280 105 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1B0GW55 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1W2PPK0 400 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms