RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TMEM242Q9NWH2 141 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 PTRH2Q9Y3E5 179 aaKnown RBP15.49■□□□□ 0.07
NUP54-205ENST00000507257 F5P12259 2224 aa15.49■□□□□ 0.07
NUP54-205ENST00000507257 FAM230AA0A1W2PPH8 454 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 NR2C1P13056 603 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 CEACAM1P13688 526 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 GABRG2P18507 467 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 ATP6V0CP27449 155 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 CDAP32320 146 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 RNF4P78317 190 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 DLK1P80370 383 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 SMAD4Q13485 552 aaKnown RBP15.48■□□□□ 0.07
NUP54-205ENST00000507257 CARFQ8N187 725 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 CCDC71LQ8N9Z2 235 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 OR5L2Q8NGL0 311 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 OR2G3Q8NGZ4 309 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 CDCA3Q99618 268 aaPredicted RBP15.48■□□□□ 0.07
NUP54-205ENST00000507257 NUDT22Q9BRQ3 303 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 SDHAF3Q9NRP4 125 aa15.48■□□□□ 0.07
NUP54-205ENST00000507257 ATXN7L1Q9ULK2 861 aaPredicted RBP15.48■□□□□ 0.07
NUP54-205ENST00000507257 IGLV3-32A0A0A0MS00 114 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 OR5H15A6NDH6 313 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 OR5H1A6NKK0 313 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 E9PLN8 166 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 EFNA2O43921 213 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 SCAF4O95104 1147 aaKnown RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 IGLV3-19P01714 112 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 ERVFRD-1P60508 538 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 NKX6-1P78426 367 aaPredicted RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 SP6Q3SY56 376 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 TMEM176BQ3YBM2 270 aaPredicted RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 OGFOD3Q6PK18 319 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 SLC22A25Q6T423 547 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 SPNS3Q6ZMD2 512 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 ZNF429Q86V71 674 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 C17orf82Q86X59 251 aaPredicted RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 BADQ92934 168 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 MOB3AQ96BX8 217 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 GNPNAT1Q96EK6 184 aaPredicted RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 NIPSNAP3BQ9BS92 247 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 VN1R1Q9GZP7 353 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 HBE1P02100 147 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 RD3LP0DJH9 198 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 MYOGP15173 224 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 CCL20P78556 96 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 ICAM4Q14773 271 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 KHDC3LQ587J8 217 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 SSX9Q7RTT3 188 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 OR5R1Q8NH85 324 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 SPSB1Q96BD6 273 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 LIN37Q96GY3 246 aaPredicted RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 RCC1LQ96I51 464 aaKnown RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 OXGR1Q96P68 337 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 HDHD3Q9BSH5 251 aaPredicted RBP15.47■□□□□ 0.07
NUP54-205ENST00000507257 SLC25A31Q9H0C2 315 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 PLEKHF2Q9H8W4 249 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 AK3Q9UIJ7 227 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 VDAC3Q9Y277 283 aa15.47■□□□□ 0.07
NUP54-205ENST00000507257 TCRBV21S2A2A0A5A6 115 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 ARGFXA6NJG6 315 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 ZNF726A6NNF4 738 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 ZNF850A8MQ14 1090 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 ZNF727A8MUV8 499 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 MMP9P14780 707 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 GABRR1P24046 479 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 OTX1P32242 354 aaPredicted RBP15.46■□□□□ 0.07
NUP54-205ENST00000507257 RND2P52198 227 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 CDPF1Q6NVV7 123 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 FAM185AQ8N0U4 392 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 TOMM40LQ969M1 308 aa15.46■□□□□ 0.07
NUP54-205ENST00000507257 TRAV1-1A0A0B4J248 108 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 TSTD3H0UI37 97 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 H3BML4 177 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 QDPRP09417 244 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 PPM1FP49593 454 aaPredicted RBP15.45■□□□□ 0.06
NUP54-205ENST00000507257 HIST1H3AP68431 136 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 PNRC1Q12796 327 aaPredicted RBP15.45■□□□□ 0.06
NUP54-205ENST00000507257 HAGHQ16775 308 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 PLPPR5Q32ZL2 321 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 ASCL4Q6XD76 172 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 FOXL2NBQ6ZUU3 175 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 KLHDC7BQ96G42 594 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 SPIN2AQ99865 258 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 SPIN2BQ9BPZ2 258 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 PIGQQ9BRB3 760 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 METTL9Q9H1A3 318 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 ZNF160Q9HCG1 818 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 FAM86C1Q9NVL1 165 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 WSB1Q9Y6I7 421 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 CCDC187A0A096LP49 1063 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 SOD3P08294 240 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 DDTP30046 118 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 ZNF41P51814 821 aaPredicted RBP15.45■□□□□ 0.06
NUP54-205ENST00000507257 FBXW4P57775 412 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 BAXQ07812 192 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 OR8B8Q15620 311 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 ZNF343Q6P1L6 599 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 GJC3Q8NFK1 279 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 POC1BQ8TC44 478 aa15.45■□□□□ 0.06
NUP54-205ENST00000507257 LYRM2Q9NU23 88 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms