RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 HDGFL3Q9Y3E1 203 aa15.27■□□□□ 0.04
HMGXB3-201ENST00000502717 DOCK3Q8IZD9 2030 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 CLEC18AA5D8T8 446 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 KLF4O43474 513 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 SPEM2Q0P670 501 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 TMEM183BQ1AE95 376 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 LANCL3Q6ZV70 420 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 CLEC18CQ8NCF0 446 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 MYOZ1Q9NP98 299 aaPredicted RBP15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 GSN-AS1Q9NRJ2 163 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 LHX6Q9UPM6 363 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 HS3ST1O14792 307 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 WDR1O75083 606 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 UPK3AO75631 287 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 LIMK1P53667 647 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 C9orf135Q5VTT2 229 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 SLC25A26Q70HW3 274 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 FAM103A1Q9BTL3 118 aaKnown RBP15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 NAT8Q9UHE5 227 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 PPP1R3CQ9UQK1 317 aa15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 NOSIPQ9Y314 301 aaKnown RBP15.27■□□□□ 0.03
HMGXB3-201ENST00000502717 BATF2Q8N1L9 274 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 ZNF707Q96C28 371 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 TECTBQ96PL2 329 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 ANKRD10Q9NXR5 420 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 ZNF236Q9UL36 1845 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 PARP14Q460N5 1801 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 A0A1B0GTQ1 180 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 MGST1P10620 155 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 LBHQ53QV2 105 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 NR2C2APQ86WQ0 139 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 ADAMTS17Q8TE56 1095 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 MMP16P51512 607 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 POLR2GP62487 172 aaKnown RBP eCLIP15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 GPX7Q96SL4 187 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 NXPH2O95156 264 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 CLDN15P56746 228 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 KRTDAPP60985 99 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 BSXQ3C1V8 233 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 POM121Q96HA1 1249 aa15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 COLQQ9Y215 455 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-201ENST00000502717 CYR61O00622 381 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 HEXAP06865 529 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 TMEM255AQ5JRV8 349 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 SYT13Q7L8C5 426 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 RER1O15258 196 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 LINC01565O15544 149 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 ZNF737O75373 536 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 CDX1P47902 265 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 PMP22Q01453 160 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 EIF3IQ13347 325 aaKnown RBP15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 CD226Q15762 336 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 ZNF260Q3ZCT1 412 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 SLC35D1Q9NTN3 355 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 GPR132Q9UNW8 380 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 TRIOBPQ9H2D6 2365 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 NPIPB9F8W1W9 429 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 KIAA1456Q9P272 454 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 MASP2O00187 686 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 ADAM11O75078 769 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 ACTL6BO94805 426 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 NTF3P20783 257 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 VAMP3Q15836 100 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 C1orf210Q8IVY1 113 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 OR1N1Q8NGS0 311 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 OR2T10Q8NGZ9 312 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 KCNE4Q8WWG9 221 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 EXTL1Q92935 676 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 OBP2BQ9NPH6 170 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 GNG12Q9UBI6 72 aa15.25■□□□□ 0.03
HMGXB3-201ENST00000502717 LPAR6P43657 344 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 HNRNPA3P51991 378 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 COTL1Q14019 142 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 EXT1Q16394 746 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 TIGITQ495A1 244 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 TNFSF15O95150 251 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 ZPBPQ9BS86 351 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 APOA2P02652 100 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 CD74P04233 296 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 EWSR1Q01844 656 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 RDH5Q92781 318 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 ADGRG7Q96K78 797 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 TRBV23-1A0A0A0MS06 115 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 DUXBA0A1W2PPF3 345 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 POU2F2P09086 479 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 ZNF25P17030 456 aaPredicted RBP15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 DDTP30046 118 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 ZNF92Q03936 586 aa15.24■□□□□ 0.03
HMGXB3-201ENST00000502717 UBE2L5PA0A1B0GUS4 154 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 OTOL1A6NHN0 477 aaPredicted RBP15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 CDS2O95674 445 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 HFEQ30201 348 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 KHDC3LQ587J8 217 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 DHRS11Q6UWP2 260 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 M1APQ8TC57 530 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 TREM2Q9NZC2 230 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 SERGEFQ9UGK8 458 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 KCNE5Q9UJ90 142 aa15.23■□□□□ 0.03
HMGXB3-201ENST00000502717 FCARP24071 287 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms