RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-218	ENST00000498136	FIP1L1	Q6UN15	594 aa	Known RBP	13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	PDZD9	Q8IXQ8	264 aa		13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	FAM185A	Q8N0U4	392 aa		13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	ASCC1	Q8N9N2	400 aa	Known RBP	13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	NRG4	Q8WWG1	115 aa		13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	VCX3B	Q9H321	246 aa		13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	BABAM2	Q9NXR7	383 aa		13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	CNOT2	Q9NZN8	540 aa	Known RBP	13.78	□□□□□ -0.2
ABCF3-218	ENST00000498136	CENPVL3	A0A0U1RRI6	287 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	COL6A5	A8TX70	2615 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136		F8VVB4	439 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136		F8VWA3	439 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	MYL12B	O14950	172 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	SULT1B1	O43704	296 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	CD2	P06729	351 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	ACTG1	P63261	375 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	BAMBI	Q13145	260 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136		Q8IYB0	196 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	OR5D18	Q8NGL1	313 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	OR52N1	Q8NH53	320 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	C8orf46	Q8TAG6	207 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	GPR148	Q8TDV2	347 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	ZNF48	Q96MX3	618 aa	Predicted RBP	13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	DUX5	Q96PT3	197 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	ESM1	Q9NQ30	184 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	SIRT7	Q9NRC8	400 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	PSORS1C1	Q9UIG5	152 aa		13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136	SOX21	Q9Y651	276 aa	Predicted RBP	13.77	□□□□□ -0.21
ABCF3-218	ENST00000498136		H0YJX3	145 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	MAGEB3	O15480	346 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	MT-ND2	P03891	347 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	CALCB	P10092	127 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	PRKACA	P17612	351 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	BCL3	P20749	454 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	NPBWR2	P48146	333 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	SNU13	P55769	128 aa	Known RBP	13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	BPIFB3	P59826	476 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	COL10A1	Q03692	680 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	PDZK1IP1	Q13113	114 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	BLMH	Q13867	455 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	LAIR2	Q6ISS4	152 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	C9orf139	Q6ZV77	190 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	PARP16	Q8N5Y8	322 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	KIR3DL3	Q8N743	410 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	ZFP41	Q8N8Y5	198 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	ZDHHC22	Q8N966	263 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	FBLIM1	Q8WUP2	373 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	ZFAND2B	Q8WV99	257 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	ZDHHC16	Q969W1	377 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	SMIM19	Q96E16	107 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	DMRTB1	Q96MA1	342 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	PLCXD1	Q9NUJ7	323 aa		13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	RBFOX1	Q9NWB1	397 aa	Known RBP	13.76	□□□□□ -0.21
ABCF3-218	ENST00000498136	TRBV23-1	A0A0A0MS06	115 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	IGHV1-69D	A0A0B4J2H0	117 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	PNMA8C	A0A1B0GUJ8	204 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	MDFIC2	A0A1B0GVS7	189 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	ANGPTL7	O43827	346 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	LALBA	P00709	142 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	IGHV1-69	P01742	117 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	TK1	P04183	234 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	CHRM2	P08172	466 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	RAB3A	P20336	220 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	RPL31	P62899	125 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	PRB3	Q04118	309 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	FAM58A	Q8N1B3	248 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	OR4M1	Q8NGD0	313 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	RGP1	Q92546	391 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	GPER1	Q99527	375 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	C19orf12	Q9NSK7	152 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	TAS2R4	Q9NYW5	299 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	ZNF281	Q9Y2X9	895 aa		13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-218	ENST00000498136		A0A1W2PPH5	198 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	DNAJC9-AS1	A6NH13	148 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	PTGES3L	E9PB15	166 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136		M0R1W7	72 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	OGG1	O15527	345 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	C21orf33	P30042	268 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	DLX1	P56177	255 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	TAS2R43	P59537	309 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	UBA52	P62987	128 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	KISS1	Q15726	138 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	DEFB112	Q30KQ8	113 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	RNF144B	Q7Z419	303 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	SATL1	Q86VE3	508 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	RPS4Y2	Q8TD47	263 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	TMEM106A	Q96A25	262 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	CPNE2	Q96FN4	548 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	SCN3B	Q9NY72	215 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	IL36RN	Q9UBH0	155 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	GLS2	Q9UI32	602 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	ERGIC3	Q9Y282	383 aa		13.74	□□□□□ -0.21
ABCF3-218	ENST00000498136	HAND1	O96004	215 aa		13.73	□□□□□ -0.21
ABCF3-218	ENST00000498136	TMEM225B	P0DP42	221 aa		13.73	□□□□□ -0.21
ABCF3-218	ENST00000498136	GABRR1	P24046	479 aa		13.73	□□□□□ -0.21
ABCF3-218	ENST00000498136	DUSP1	P28562	367 aa		13.73	□□□□□ -0.21
ABCF3-218	ENST00000498136	WNT4	P56705	351 aa		13.73	□□□□□ -0.21
ABCF3-218	ENST00000498136	EDDM3B	P56851	147 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms