RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 CHTOPQ9Y3Y2 248 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 FRG2CA6NGY1 282 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 C17orf105B2RV13 164 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 KLF8O95600 359 aaPredicted RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 SCGB1D2O95969 90 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 RPS2P15880 293 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 GNB3P16520 340 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 RAB7AP51149 207 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 MMP16P51512 607 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 DCAF7P61962 342 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 C1orf189Q5VU69 101 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 RTL6Q6ICC9 239 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 PLXDC2Q6UX71 529 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 MAML2Q8IZL2 1156 aaPredicted RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 DTWD2Q8NBA8 298 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 NOXO1Q8NFA2 376 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 OR2I1PQ8NGU4 316 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 FOXN4Q96NZ1 517 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 FKBP11Q9NYL4 201 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 ALPK2Q86TB3 2170 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 BORCS7-ASMTA0A0B4J1R7 106 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 C20orf202A1L168 122 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 K7N7A8 449 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 PRKNO60260 465 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 NPIPB7O75200 414 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 ZNF217O75362 1048 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 TNFP01375 233 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 WNT5AP41221 380 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 UCP3P55916 312 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 QRFPP83859 136 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 FOXF1Q12946 379 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 GPM6BQ13491 265 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 C1QL3Q5VWW1 255 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 Q8NFD4 153 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 FAM46BQ96A09 425 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 TMEM18Q96B42 140 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 CABLES2Q9BTV7 478 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 EMC9Q9Y3B6 208 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 WSB1Q9Y6I7 421 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 TRDCB7Z8K6 153 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 CLDN34H7C241 214 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 CBR3O75828 277 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 CHRM2P08172 466 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 CHRNB4P30926 498 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 ALDH3B1P43353 468 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 RND2P52198 227 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 HLA-DRB3P79483 266 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 Q6ZSR6 202 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 NUFIP2Q7Z417 695 aaKnown RBP10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 PTPMT1Q8WUK0 201 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 RTBDNQ9BSG5 229 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 GLRX2Q9NS18 164 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 FBLN5Q9UBX5 448 aa10.15□□□□□ -0.78
SEC61A1-205ENST00000483956 TRANK1O15050 2925 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 AHSA1O95433 338 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 BPNT1O95861 308 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 HSD11B1P28845 292 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 P2RY1P47900 373 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 PTTG1IPP53801 180 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 ICAM4Q14773 271 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 SPSB3Q6PJ21 355 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 CYYR1Q96J86 154 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 RTN4RQ9BZR6 473 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 LRFN1Q9P244 771 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 PPIAL4AQ9Y536 164 aa10.15□□□□□ -0.79
SEC61A1-205ENST00000483956 TRBV24-1A0A075B6N3 115 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 A0A1W2PQD3 144 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 CBY3A6NI87 242 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 NKX6-3A6NJ46 265 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 METTL12A8MUP2 240 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 HCRTR2O43614 444 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 CEACAM1P13688 526 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 GLRA1P23415 457 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 SELENOTP62341 195 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 HHEXQ03014 270 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 UNC119Q13432 240 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 FAM189A2Q15884 450 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 RIPPLY2Q5TAB7 128 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 WDR25Q64LD2 544 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC22A18ASQ8N1D0 253 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ADPRHL1Q8NDY3 354 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ADOQ96SZ5 270 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 GSX1Q9H4S2 264 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 CNTD2Q9H8S5 307 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 HS3ST3A1Q9Y663 406 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 TMEM238LA0A1B0GVL6 79 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF705DP0CH99 300 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF705BP0CI00 300 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 MMP9P14780 707 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 RAC2P15153 192 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 VAMP2P63027 116 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms