RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FGF17O60258 216 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 YPEL1O60688 119 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 GPR75O95800 540 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 H2BFMP0C1H6 154 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 SMIM10L1P0DMW3 83 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 GALR1P47211 349 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 MTCP1P56278 107 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 DEFB134Q4QY38 66 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 IL22RA1Q8N6P7 574 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 OR52M1Q8NGK5 317 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 MOB3AQ96BX8 217 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 SMIM10Q96HG1 83 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 S1PR5Q9H228 398 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 PLK3Q9H4B4 646 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 OR6C3Q9NZP0 311 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 CCL15-CCL14A0A0B4J2E2 113 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 HSBP1L1C9JCN9 74 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 MMP9P14780 707 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 UBE2NP61088 152 aaKnown RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 EGR4Q05215 589 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 CCL15Q16663 113 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 NPAS4Q8IUM7 802 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM123Q8N131 208 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 KCNE4Q8WWG9 221 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 FOXN4Q96NZ1 517 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 VN1R1Q9GZP7 353 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 ELL3Q9HB65 397 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-206ENST00000476391 SLC16A7O60669 478 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 HRASP01112 189 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ASGR1P07306 291 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 RAC2P15153 192 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 FOSL2P15408 326 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ASCL1P50553 236 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ZNF92Q03936 586 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 TOMM20LQ6UXN7 152 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 OR4N2Q8NGD1 307 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-206ENST00000476391 AGMATQ9BSE5 352 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 C11orf1Q9H5F2 150 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 NAA60Q9H7X0 242 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 PLEKHF2Q9H8W4 249 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM106BQ9NUM4 274 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 MRPS2Q9Y399 296 aaKnown RBP12.1□□□□□ -0.47
HDAC1-206ENST00000476391 CLDN16Q9Y5I7 305 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 H7BYZ3 331 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 TOMM40O96008 361 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-206ENST00000476391 PEBP1P30086 187 aaKnown RBP12.1□□□□□ -0.47
HDAC1-206ENST00000476391 PIGPP57054 158 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ADAMTSL4Q6UY14 1074 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
HDAC1-206ENST00000476391 LGI3Q8N145 548 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 NUDT10Q8NFP7 164 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 PCGF1Q9BSM1 259 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 LYRM4Q9HD34 91 aa12.1□□□□□ -0.47
HDAC1-206ENST00000476391 HIDE1A8MVS5 230 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 TPTE2P1Q5T6R2 138 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CYP2G1PQ6ZSU1 146 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 OR4D5Q8NGN0 318 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 OR10S1Q8NGN2 331 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 ZNF845Q96IR2 970 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-206ENST00000476391 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 SPACA6W5XKT8 324 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 DOCK9Q9BZ29 2069 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 FAM24AA6NFZ4 105 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 FOXS1O43638 330 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 NDUFB8O95169 186 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CT45A8P0DMV1 189 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CT45A9P0DMV2 189 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CARD18P57730 90 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CT45A2Q5DJT8 189 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 TCEAL5Q5H9L2 206 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms