RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MKRN2OSH3BPM6 223 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 CELA2BP08218 269 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF17P17021 662 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 RRADP55042 308 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 EWSR1Q01844 656 aaKnown RBP eCLIP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 FOXO1Q12778 655 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 MS4A18Q3C1V0 323 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 OR5R1Q8NH85 324 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 C5orf34Q96MH7 638 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 PHF7Q9BWX1 381 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 CCDC163A0A0D9SF12 145 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 PAX1P15863 534 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 OPRM1P35372 400 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 POLR2HP52434 150 aaKnown RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 FZD2Q14332 565 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 LBHQ53QV2 105 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 TCEAL6Q6IPX3 200 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 STT3BQ8TCJ2 826 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 RTN4IP1Q8WWV3 396 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 LIN37Q96GY3 246 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 C8orf33Q9H7E9 229 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 OR14J1Q9UGF5 321 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 STMND1H3BQB6 276 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 IGHMP01871 453 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 DBHP09172 617 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 FGF7P21781 194 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 CDAP32320 146 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF121P58317 390 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-207ENST00000470763 RUNX1Q01196 453 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 TMEM187Q14656 261 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 ABCA11PQ4W5N1 156 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 DNLZQ5SXM8 178 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF880Q6PDB4 577 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 C1orf87Q8N0U7 546 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 PLPP5Q8NEB5 264 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 NDUFAF3Q9BU61 184 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 SIRT7Q9NRC8 400 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 CCDC187A0A096LP49 1063 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 FAM221AA4D161 298 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 ONECUT2O95948 504 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 CD81P60033 236 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 NKAIN1Q4KMZ8 207 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 SLC22A25Q6T423 547 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 SLC37A2Q8TED4 501 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 TSLPQ969D9 159 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 TWSG1Q9GZX9 223 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
NPHP4-207ENST00000470763 C5orf63A6NC05 138 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 A6NIZ1 184 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 CSNK1A1P48729 337 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 RAP1BP61224 184 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 KISS1Q15726 138 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 TMEM123Q8N131 208 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 HAS2Q92819 552 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 BMFQ96LC9 184 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 LRFN3Q9BTN0 628 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 SMDT1Q9H4I9 107 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 HSF4Q9ULV5 492 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 ADAMTS9Q9P2N4 1935 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 VPS13AQ96RL7 3174 aa12.02□□□□□ -0.48
NPHP4-207ENST00000470763 TECTAO75443 2155 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 BIDP55957 195 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 RPL23AP62750 156 aaKnown RBP12.02□□□□□ -0.49
NPHP4-207ENST00000470763 RNF4P78317 190 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 JOSD1Q15040 202 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-207ENST00000470763 MEX3BQ6ZN04 569 aaKnown RBP12.02□□□□□ -0.49
NPHP4-207ENST00000470763 FAM57BQ71RH2 274 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 FAM89BQ8N5H3 189 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 OR11L1Q8NGX0 322 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 THOC3Q96J01 351 aaKnown RBP12.02□□□□□ -0.49
NPHP4-207ENST00000470763 GPR87Q9BY21 358 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 NAA60Q9H7X0 242 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 AMBPP02760 352 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 PPM1FP49593 454 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-207ENST00000470763 HLA-DRB3P79483 266 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 RUNX3Q13761 415 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 TMEM171Q8WVE6 324 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 PLEKHJ1Q9NW61 149 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 ZNF581Q9P0T4 197 aa12.02□□□□□ -0.49
NPHP4-207ENST00000470763 C2orf16Q68DN1 1984 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 LAMA1P25391 3075 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 MSTNO14793 375 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 IL18BPO95998 194 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 HNRNPA1P09651 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
NPHP4-207ENST00000470763 DUSP1P28562 367 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 RAB11AP62491 216 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 TANGO2Q6ICL3 276 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 TMEM217Q8N7C4 229 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 OR14L1PQ8NHC6 308 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 LHFPL6Q9Y693 200 aa12.01□□□□□ -0.49
NPHP4-207ENST00000470763 NCOA6Q14686 2063 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms