RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM106AQ96A25 262 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 WDFY2Q96P53 400 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 TBX15Q96SF7 602 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 ANKRD60Q9BZ19 345 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 ONECUT1Q9UBC0 465 aa10.65□□□□□ -0.7
COL5A1-206ENST00000465877 SIRT4Q9Y6E7 314 aaPredicted RBP10.65□□□□□ -0.7
COL5A1-206ENST00000465877 A0A0A6YYJ9 748 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 OGG1O15527 345 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 INMTO95050 263 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 VENTXO95231 258 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 CD2P06729 351 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 BCL3P20749 454 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 MYF6P23409 242 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 FPR2P25090 351 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 HSPA13P48723 471 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 WNT4P56705 351 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 TAS2R43P59537 309 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 DOC2BQ14184 412 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 TUSC1Q2TAM9 212 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 GPR157Q5UAW9 335 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
COL5A1-206ENST00000465877 ASPHD2Q6ICH7 369 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 CRIP3Q6Q6R5 217 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 BRD3OSQ6XYD6 125 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 SERPINA12Q8IW75 414 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF561Q8N587 486 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 KIR3DL3Q8N743 410 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 OR5D18Q8NGL1 313 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 OR13C5Q8NGS8 318 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 PGLYRP3Q96LB9 341 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 MS4A7Q9GZW8 240 aaPredicted RBP10.64□□□□□ -0.71
COL5A1-206ENST00000465877 NEK6Q9HC98 313 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 RBFOX1Q9NWB1 397 aaKnown RBP10.64□□□□□ -0.71
COL5A1-206ENST00000465877 BABAM2Q9NXR7 383 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 TAS2R4Q9NYW5 299 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 IL36RNQ9UBH0 155 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 KPTNQ9Y664 436 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
COL5A1-206ENST00000465877 TRBV23-1A0A0A0MS06 115 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 PNMA8CA0A1B0GUJ8 204 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 A0A1W2PQ09 198 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 ANGPTL7O43827 346 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 ALX3O95076 343 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 CDK1P06493 297 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 RAB3AP20336 220 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 PRDX2P32119 198 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 NPBWR2P48146 333 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 ARF6P62330 175 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 PDZK1IP1Q13113 114 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 RIPK1Q13546 671 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 C6orf141Q5SZD1 244 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF529Q6P280 563 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 FIP1L1Q6UN15 594 aaKnown RBP10.63□□□□□ -0.71
COL5A1-206ENST00000465877 C9orf139Q6ZV77 190 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 RNF144BQ7Z419 303 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 VMO1Q7Z5L0 202 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 MKXQ8IYA7 352 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 CMTM4Q8IZR5 234 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 BCL6BQ8N143 479 aaPredicted RBP10.63□□□□□ -0.71
COL5A1-206ENST00000465877 SIGLECL1Q8N7X8 197 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 OR51A2Q8NGJ7 313 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 OR5D14Q8NGL3 314 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 CPNE2Q96FN4 548 aaPredicted RBP10.63□□□□□ -0.71
COL5A1-206ENST00000465877 DMRTB1Q96MA1 342 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 C19orf24Q9BVV8 132 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 MND1Q9BWT6 205 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 PAK1IP1Q9NWT1 392 aaPredicted RBP10.63□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF281Q9Y2X9 895 aa10.63□□□□□ -0.71
COL5A1-206ENST00000465877 PRKACAP17612 351 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 SNU13P55769 128 aaKnown RBP10.62□□□□□ -0.71
COL5A1-206ENST00000465877 ZP1P60852 638 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 SLC35A2P78381 396 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 COL10A1Q03692 680 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 PDCD1Q15116 288 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 KISS1Q15726 138 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 YIF1BQ5BJH7 314 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
COL5A1-206ENST00000465877 SGCDQ92629 289 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 GHSRQ92847 366 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 LHX4Q969G2 390 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF48Q96MX3 618 aaPredicted RBP10.62□□□□□ -0.71
COL5A1-206ENST00000465877 JMJD8Q96S16 334 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 FAM234AQ9H0X4 552 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 CNTD2Q9H8S5 307 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 ESM1Q9NQ30 184 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 SIRT7Q9NRC8 400 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 C19orf12Q9NSK7 152 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 SCN3BQ9NY72 215 aa10.62□□□□□ -0.71
COL5A1-206ENST00000465877 IGKV1-12A0A0C4DH73 117 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 TRBV5-5A0A0J9YX44 114 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 CENPVL3A0A0U1RRI6 287 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 GABRPO00591 440 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF737O75373 536 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 KDM4BO94953 1096 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 HAND1O96004 215 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 IGKV1D-12P01611 117 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 TK1P04183 234 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 RPS11P62280 158 aaKnown RBP eCLIP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms