RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ZNF266Q14584 549 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 IL13RA2Q14627 380 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 ADIRFQ15847 76 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 ACTL10Q5JWF8 245 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 LINC00346Q8IVM7 164 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 CMTM1Q8IZ96 169 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 LYG1Q8N1E2 194 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 OR10G4Q8NGN3 311 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 ZCCHC14Q8WYQ9 949 aaKnown RBP16.34■□□□□ 0.21
PTPA-223ENST00000452489 CTDSP1Q9GZU7 261 aa16.34■□□□□ 0.21
PTPA-223ENST00000452489 MRPS28Q9Y2Q9 187 aaKnown RBP16.34■□□□□ 0.21
PTPA-223ENST00000452489 ST8SIA3O43173 380 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 DMRTC1Q5HYR2 192 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 DAZLQ92904 295 aaKnown RBP16.33■□□□□ 0.2
PTPA-223ENST00000452489 C1orf147Q96MC9 270 aaPredicted RBP16.33■□□□□ 0.2
PTPA-223ENST00000452489 KLHDC3Q9BQ90 382 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 TMEM59Q9BXS4 323 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 PRSS47A8MTI9 375 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 SFTPDP35247 375 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 CST9LP1Q5W188 147 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 Q6ZVH6 145 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 ATG4DQ86TL0 474 aaPredicted RBP16.33■□□□□ 0.2
PTPA-223ENST00000452489 ADPRHL1Q8NDY3 354 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 OR51G1Q8NGK1 321 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 SVIPQ8NHG7 77 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 OIT3Q8WWZ8 545 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 ARRDC3Q96B67 414 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 RNF115Q9Y4L5 304 aa16.33■□□□□ 0.2
PTPA-223ENST00000452489 DOCK9Q9BZ29 2069 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 CBY3A6NI87 242 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 ZNF878C9JN71 531 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 B3GALT2O43825 422 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 ONECUT2O95948 504 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 SELPP16109 830 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 PIGPP57054 158 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 DPTQ07507 201 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 MMDQ15546 238 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 DEFB132Q7Z7B7 95 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 PTPMT1Q8WUK0 201 aaPredicted RBP16.32■□□□□ 0.2
PTPA-223ENST00000452489 GSX1Q9H4S2 264 aaPredicted RBP16.32■□□□□ 0.2
PTPA-223ENST00000452489 ZNF665Q9H7R5 613 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 FREM3P0C091 2139 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 IGLV1-36A0A0B4J1U3 117 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 SERINC4A6NH21 518 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 K7EP13 123 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 HRKO00198 91 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 FOXS1O43638 330 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 TRAPPC6AO75865 159 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 IGHEP01854 428 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 GALR1P47211 349 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 CSNK1A1P48729 337 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 HIST1H3AP68431 136 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 RTP5Q14D33 572 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 ZNF141Q15928 474 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 ZNF765Q7L2R6 523 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 TGIF2LYQ8IUE0 185 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 OR2C3Q8N628 320 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 STPG4Q8N801 248 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 LIPHQ8WWY8 451 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 COX14Q96I36 57 aa16.32■□□□□ 0.2
PTPA-223ENST00000452489 ZNF701Q9NV72 531 aaPredicted RBP16.32■□□□□ 0.2
PTPA-223ENST00000452489 LAMA2P24043 3122 aaKnown RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 A0A1W2PRU2 124 aa16.31■□□□□ 0.2
PTPA-223ENST00000452489 PRKNO60260 465 aaPredicted RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 CTSDP07339 412 aaPredicted RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 KLF3P57682 345 aaPredicted RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 FAM3BP58499 235 aaPredicted RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 TMEM187Q14656 261 aa16.31■□□□□ 0.2
PTPA-223ENST00000452489 PSRC1Q6PGN9 363 aaPredicted RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 ALKBH7Q9BT30 221 aaPredicted RBP16.31■□□□□ 0.2
PTPA-223ENST00000452489 FBLN5Q9UBX5 448 aa16.31■□□□□ 0.2
PTPA-223ENST00000452489 PRSS37A4D1T9 235 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 CMPK1P30085 196 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 CNN1P51911 297 aaKnown RBP16.3■□□□□ 0.2
PTPA-223ENST00000452489 RIPPLY2Q5TAB7 128 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 TOMM40LQ969M1 308 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 SPACA7Q96KW9 195 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 NCOR1P1Q9H4R4 102 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 LOC105371242A0A075B767 164 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 CALHM1Q8IU99 346 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 TMEM217Q8N7C4 229 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 SUMF1Q8NBK3 374 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 OR5C1Q8NGR4 320 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 LIME1Q9H400 295 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 GLRX2Q9NS18 164 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 CENPMQ9NSP4 180 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 B3GALT1Q9Y5Z6 326 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 OBSL1O75147 1896 aa16.3■□□□□ 0.2
PTPA-223ENST00000452489 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 TNFSF12O43508 249 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 PITX3O75364 302 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 GPR75O95800 540 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 DDAH2O95865 285 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 BCL2P10415 239 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 CSF2RAP15509 400 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 DUSP1P28562 367 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 IL24Q13007 206 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 CBLN3Q6UW01 205 aa16.29■□□□□ 0.2
PTPA-223ENST00000452489 CTHRC1Q96CG8 243 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms