RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PRKACAP17612 351 aa18.79■□□□□ 0.6
VSX1-205ENST00000429762 CHATP28329 748 aa18.79■□□□□ 0.6
VSX1-205ENST00000429762 GRNP28799 593 aaKnown RBP18.79■□□□□ 0.6
VSX1-205ENST00000429762 FAUP35544 74 aaKnown RBP18.79■□□□□ 0.6
VSX1-205ENST00000429762 ASCL1P50553 236 aa18.79■□□□□ 0.6
VSX1-205ENST00000429762 BTN2A1Q7KYR7 527 aa18.79■□□□□ 0.6
VSX1-205ENST00000429762 FBXW5Q969U6 566 aa18.79■□□□□ 0.6
VSX1-205ENST00000429762 AK3Q9UIJ7 227 aa18.79■□□□□ 0.6
VSX1-205ENST00000429762 LRP5LA4QPB2 252 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 CDIPTO14735 213 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 OR7C1O76099 320 aaPredicted RBP18.78■□□□□ 0.6
VSX1-205ENST00000429762 H2AFB2P0C5Z0 115 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 TUBG1P23258 451 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 FGF12P61328 243 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 IL24Q13007 206 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 PRAMEF6Q5VXH4 476 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 TMEM200AQ86VY9 491 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 TMEM171Q8WVE6 324 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 EMG1Q92979 244 aaKnown RBP18.78■□□□□ 0.6
VSX1-205ENST00000429762 ST6GALNAC5Q9BVH7 336 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 TUBG2Q9NRH3 451 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 ACACBO00763 2458 aa18.78■□□□□ 0.6
VSX1-205ENST00000429762 UBE2QL1A1L167 161 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 ABCD4O14678 606 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 ARPC1BO15143 372 aaKnown RBP18.77■□□□□ 0.6
VSX1-205ENST00000429762 PMP2P02689 132 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 AMY2AP04746 511 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 CHRNB4P30926 498 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 GLRXP35754 106 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 BSPH1Q075Z2 132 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 ATAD3CQ5T2N8 411 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 HPS1Q92902 700 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 MRPS24Q96EL2 167 aaKnown RBP18.77■□□□□ 0.6
VSX1-205ENST00000429762 PKIBQ9C010 78 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.77■□□□□ 0.6
VSX1-205ENST00000429762 PCDHB16Q9NRJ7 776 aa18.77■□□□□ 0.6
VSX1-205ENST00000429762 FAM221AA4D161 298 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 MPZP25189 248 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 HRH1P35367 487 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 ELP2Q6IA86 826 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 TMEM108Q6UXF1 575 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 ZNF826PQ6ZT77 177 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 ZNF554Q86TJ5 538 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 Q8NFD4 153 aa18.77■□□□□ 0.59
VSX1-205ENST00000429762 NOP16Q9Y3C1 178 aaKnown RBP18.77■□□□□ 0.59
VSX1-205ENST00000429762 CD74P04233 296 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 ZNF735P0CB33 412 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 ZNF250P15622 560 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 MAB21L1Q13394 359 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 FAM76BQ5HYJ3 339 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 SLC6A7Q99884 636 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 CXXC4Q9H2H0 198 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 ZNF701Q9NV72 531 aaPredicted RBP18.76■□□□□ 0.59
VSX1-205ENST00000429762 COPZ2Q9P299 210 aa18.76■□□□□ 0.59
VSX1-205ENST00000429762 ZSCAN5BA6NJL1 495 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 SERPINE3A8MV23 424 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 A8MV72 311 aaPredicted RBP18.75■□□□□ 0.59
VSX1-205ENST00000429762 HSPB6O14558 160 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 AKR7A2O43488 359 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 KLF3P57682 345 aaPredicted RBP18.75■□□□□ 0.59
VSX1-205ENST00000429762 MPPED2Q15777 294 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 BPIFB2Q8N4F0 458 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 OR2Z1Q8NG97 314 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 USB1Q9BQ65 265 aaKnown RBP18.75■□□□□ 0.59
VSX1-205ENST00000429762 GINS4Q9BRT9 223 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 MRPL37Q9BZE1 423 aaKnown RBP18.75■□□□□ 0.59
VSX1-205ENST00000429762 UFSP2Q9NUQ7 469 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 COQ3Q9NZJ6 369 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 ANAPC10Q9UM13 185 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.75■□□□□ 0.59
VSX1-205ENST00000429762 PDCD6O75340 191 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 NDUFB6O95139 128 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 HNRNPCP07910 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
VSX1-205ENST00000429762 UQCRFS1P47985 274 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 IKZF1Q13422 519 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 SCGB2B2Q4G0G5 96 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 SLC22A25Q6T423 547 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 C1orf174Q8IYL3 243 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 BEST4Q8NFU0 473 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 OR13G1Q8NGZ3 307 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 OCSTAMPQ9BR26 566 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 HSF4Q9ULV5 492 aa18.75■□□□□ 0.59
VSX1-205ENST00000429762 IGKV1D-8A0A087WSZ0 117 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 BTG1P62324 171 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 MICBQ29980 383 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 RNASE10Q5GAN6 216 aaKnown RBP18.74■□□□□ 0.59
VSX1-205ENST00000429762 ADAM5Q6NVV9 412 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 C11orf53Q8IXP5 236 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 FAM58AQ8N1B3 248 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 OR4K15Q8NH41 348 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 LINC01560Q8TB33 94 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 PRR7Q8TB68 274 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 GIMAP1Q8WWP7 306 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 ATP23Q9Y6H3 246 aa18.74■□□□□ 0.59
VSX1-205ENST00000429762 A0A0A6YYJ9 748 aa18.73■□□□□ 0.59
VSX1-205ENST00000429762 A6NLC8 198 aa18.73■□□□□ 0.59
VSX1-205ENST00000429762 IGHV3-13P01766 116 aa18.73■□□□□ 0.59
VSX1-205ENST00000429762 AMY2BP19961 511 aa18.73■□□□□ 0.59
VSX1-205ENST00000429762 ANXA7P20073 488 aaKnown RBP18.73■□□□□ 0.59
VSX1-205ENST00000429762 PTAFRP25105 342 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms