RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ACTBL2Q562R1 376 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SPANXN4Q5MJ08 99 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CTSL3PQ5NE16 218 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ATAD3CQ5T2N8 411 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF470Q6ECI4 717 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAM166AQ6J272 317 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 KRT80Q6KB66 452 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC27A4Q6P1M0 643 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 AGTRAPQ6RW13 159 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 UGT2A3Q6UWM9 527 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CES3Q6UWW8 571 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMIGD1Q6UXZ0 262 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 DNM1P46Q6ZS02 220 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 LINC00299Q6ZSB3 139 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMUB2Q71RG4 321 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF550Q7Z398 422 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SPATA19Q7Z5L4 167 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CARM1Q86X55 608 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TGIF2LXQ8IUE1 241 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 KDM8Q8N371 416 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRSS35Q8N3Z0 413 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 C3orf56Q8N813 242 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRELID2Q8N945 189 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CNEP1R1Q8N9A8 125 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMEM104Q8NE00 496 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CCDC54Q8NEL0 328 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR1J4Q8NGS1 313 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR4Q3Q8NH05 313 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTRT1Q8TDG2 376 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF721Q8TF20 911 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 C16orf78Q8WTQ4 265 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SFT2D1Q8WV19 159 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMEM203Q969S6 136 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 STARD4Q96DR4 205 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZHX1-C8orf76Q96EF9 292 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 PACRGQ96M98 296 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR5M11Q96RB7 305 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TEAD3Q99594 435 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 DCUN1D5Q9BTE7 237 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 UBQLN3Q9H347 655 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 MOB1AQ9H8S9 216 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 WDR41Q9HAD4 459 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 NANSQ9NR45 359 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SIRT7Q9NRC8 400 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TUBG2Q9NRH3 451 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TREX1Q9NSU2 369 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 MS4A12Q9NXJ0 267 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 PEF1Q9UBV8 284 aaKnown RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 OPN4Q9UHM6 478 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 LEF1Q9UJU2 399 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB26Q9ULW5 256 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SSR3Q9UNL2 185 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CHCHD2Q9Y6H1 151 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 KIF25-AS1Q9Y6Z4 181 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CADP27708 2225 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A0G2JMP0 313 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A1B0GW55 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A1W2PNV4 684 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A1W2PP18 115 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 H3BSA7 217 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 J3QRK9 145 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 K7EQG2 157 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 RTL8CO15255 209 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 EMC8O43402 210 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 EIF3GO75821 320 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 GLCEO94923 617 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 IFNGP01579 166 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DUX4L2P0CJ85 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DUX4L3P0CJ86 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DUX4L5P0CJ88 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DUX4L6P0CJ89 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DUX4L7P0CJ90 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 EPORP19235 508 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 SRMP19623 302 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 NPR2P20594 1047 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 PAICSP22234 425 aaKnown RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DCKP27707 260 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 LOXP28300 417 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 ELK4P28324 431 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 IL12BP29460 328 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 RGS4P49798 205 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 IDH3GP51553 393 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB5BP61020 215 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 MRPS22P82650 360 aaKnown RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 NDPQ00604 133 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 SRYQ05066 204 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 TNFRSF9Q07011 255 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 FUT7Q11130 342 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB35Q15286 201 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRAM1Q15629 374 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 MPPED2Q15777 294 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 CHI3L2Q15782 390 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 GRK1Q15835 563 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 RNASE10Q5GAN6 216 aaKnown RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAM120AOSQ5T036 256 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRAMEF5Q5TYX0 476 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRAMEF6Q5VXH4 476 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 TIGD3Q6B0B8 471 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms