RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 DGAT2L6Q6ZPD8 337 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 FAM231DQ6ZW35 169 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 ZNF329Q86UD4 541 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
LSM5-205ENST00000409952 GATD1Q8NB37 220 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 HAVCR2Q8TDQ0 301 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 ABHD3Q8WU67 409 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 DCAKDQ8WVC6 231 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 C22orf15Q8WYQ4 148 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 FAM104AQ969W3 186 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 SNF8Q96H20 258 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 TIMM17AQ99595 171 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 HSD17B10Q99714 261 aaKnown RBP3.52□□□□□ -1.85
LSM5-205ENST00000409952 IL37Q9NZH6 218 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 NUFIP1Q9UHK0 495 aaKnown RBP3.52□□□□□ -1.85
LSM5-205ENST00000409952 ADGRL3Q9HAR2 1447 aa3.52□□□□□ -1.85
LSM5-205ENST00000409952 TNRQ92752 1358 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 EPOPA6NHQ4 379 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 METTL15A6NJ78 407 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 ZFP92A6NM28 416 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 SPAG7O75391 227 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 DHRS3O75911 302 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 AKR1C4P17516 323 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 RCVRNP35243 200 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OMPP47874 163 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 SERPINB9P50453 376 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 GFERP55789 205 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 ARG2P78540 354 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 CRADDP78560 199 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 PDK2Q15119 407 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 IRF4Q15306 451 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 SNCBQ16143 134 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 TMEM183BQ1AE95 376 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 FBXL19-AS1Q494R0 122 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 FAM162BQ5T6X4 162 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 XKRXQ6PP77 449 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OPN5Q6U736 354 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 NCCRP1Q6ZVX7 275 aaPredicted RBP3.51□□□□□ -1.85
LSM5-205ENST00000409952 C11orf53Q8IXP5 236 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 TMEM183AQ8IXX5 376 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 CEND1Q8N111 149 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 STK40Q8N2I9 435 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 ZNF485Q8NCK3 441 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 SLC26A10Q8NG04 563 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OR1M1Q8NGA1 313 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OR4P4Q8NGL7 312 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 ERMNQ8TAM6 284 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 MRPL48Q96GC5 212 aaKnown RBP3.51□□□□□ -1.85
LSM5-205ENST00000409952 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 SMIM8Q96KF7 97 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OR2M2Q96R28 347 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OR51E2Q9H255 320 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 OR51B6Q9H340 312 aa3.51□□□□□ -1.85
LSM5-205ENST00000409952 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.51□□□□□ -1.85
LSM5-205ENST00000409952 NRCAMQ92823 1304 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 RALGAPA1Q6GYQ0 2036 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 TRAV19A0A0A6YYK7 116 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 TRAV8-2A0A0B4J237 113 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 ZNF705GA8MUZ8 300 aaPredicted RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 KCNK1O00180 336 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 CCDC22O60826 627 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 PDCD6O75340 191 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 HIST1H1EP10412 219 aaKnown RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 PRPS1L1P21108 318 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 RBMXP38159 391 aaKnown RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 C1QTNF8P60827 252 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 ADIGQ0VDE8 80 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 SRSF6Q13247 344 aaKnown RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 PNOCQ13519 176 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 Q499Y3 187 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 ZNF658BQ4V348 819 aaPredicted RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 ATP6AP1LQ52LC2 224 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 TMEM255AQ5JRV8 349 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 TSPO2Q5TGU0 170 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 CEMP1Q6PRD7 247 aaPredicted RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 Q6ZSR6 202 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 OR4C13Q8NGP0 309 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 ZNF420Q8TAQ5 688 aaPredicted RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 ENKURQ8TC29 256 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 C16orf78Q8WTQ4 265 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 FAM222BQ8WU58 562 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 ASB13Q8WXK3 278 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 CCL17Q92583 94 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 PTX4Q96A99 478 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 PPCDCQ96CD2 204 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 OPTNQ96CV9 577 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 DGCR14Q96DF8 476 aaKnown RBP3.5□□□□□ -1.85
LSM5-205ENST00000409952 FMC1Q96HJ9 113 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 CEP170P1Q96L14 293 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 SPACA5Q96QH8 159 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 DMAC2Q9NW81 257 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 ENPP4Q9Y6X5 453 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 RIMS2Q9UQ26 1411 aa3.5□□□□□ -1.85
LSM5-205ENST00000409952 RIMBP3CA6NJZ7 1639 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 RIMBP3BA6NNM3 1639 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 RIMBP3Q9UFD9 1639 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 TDRD15B5MCY1 1934 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms