RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 METAP1DQ6UB28 335 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-205ENST00000372244 MKXQ8IYA7 352 aa16.47■□□□□ 0.23
TMEM53-205ENST00000372244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-205ENST00000372244 TMEM185AQ8NFB2 350 aa16.47■□□□□ 0.23
TMEM53-205ENST00000372244 OR52N1Q8NH53 320 aa16.47■□□□□ 0.23
TMEM53-205ENST00000372244 RGP1Q92546 391 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-205ENST00000372244 OPALINQ96PE5 141 aa16.47■□□□□ 0.23
TMEM53-205ENST00000372244 TRBV23-1A0A0A0MS06 115 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 ERICH4A6NGS2 130 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 SLC1A7O00341 560 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 XPNPEP2O43895 674 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 CEBPDP49716 269 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-205ENST00000372244 UBA52P62987 128 aaKnown RBP16.46■□□□□ 0.23
TMEM53-205ENST00000372244 ZNF529Q6P280 563 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 RNF144BQ7Z419 303 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 VMO1Q7Z5L0 202 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 Q8IYB0 196 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 CMTM4Q8IZR5 234 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 OR13C9Q8NGT0 318 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 GATAD2BQ8WXI9 593 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 FAM234AQ9H0X4 552 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 UNKLQ9H9P5 680 aaKnown RBP16.46■□□□□ 0.23
TMEM53-205ENST00000372244 FKBP14Q9NWM8 211 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 ONECUT1Q9UBC0 465 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 DHDHQ9UQ10 334 aa16.46■□□□□ 0.23
TMEM53-205ENST00000372244 IGHV1-69DA0A0B4J2H0 117 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 CLDN34H7C241 214 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 K7N7A8 449 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 M0R1W7 72 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 LALBAP00709 142 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 IGHV1-69P01742 117 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 PRTN3P24158 256 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 NPBWR2P48146 333 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 TNFRSF14Q92956 283 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 LHX4Q969G2 390 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 ELL3Q9HB65 397 aaPredicted RBP16.45■□□□□ 0.22
TMEM53-205ENST00000372244 CHCHD3Q9NX63 227 aaKnown RBP16.45■□□□□ 0.22
TMEM53-205ENST00000372244 OR14J1Q9UGF5 321 aa16.45■□□□□ 0.22
TMEM53-205ENST00000372244 ZNF737O75373 536 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 TK1P04183 234 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 CHRM2P08172 466 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 C21orf33P30042 268 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-205ENST00000372244 MED21Q13503 144 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 DEFB112Q30KQ8 113 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 DMKNQ6E0U4 476 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-205ENST00000372244 GPR148Q8TDV2 347 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 C19orf12Q9NSK7 152 aa16.44■□□□□ 0.22
TMEM53-205ENST00000372244 IGKV1-12A0A0C4DH73 117 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 SULT1B1O43704 296 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 INMTO95050 263 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 IGKV1D-12P01611 117 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 POU3F4P49335 361 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 CAPZA1P52907 286 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 AQP4P55087 323 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 BAMBIQ13145 260 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 ZNF146Q15072 292 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 RUSC1-AS1Q66K80 236 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 TMEM200BQ69YZ2 307 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 ASPHD2Q6ICH7 369 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 SAXO1Q8IYX7 474 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 FAM58AQ8N1B3 248 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 BPIFB6Q8NFQ5 453 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 SMIM19Q96E16 107 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 SPACA5Q96QH8 159 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 NEK6Q9HC98 313 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 RBFOX1Q9NWB1 397 aaKnown RBP16.43■□□□□ 0.22
TMEM53-205ENST00000372244 ZNF281Q9Y2X9 895 aa16.43■□□□□ 0.22
TMEM53-205ENST00000372244 TENM1Q9UKZ4 2725 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 DNAJC9-AS1A6NH13 148 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 SPRY1O43609 319 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 CYB5AP00167 134 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 OCM2P0CE71 109 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 OCMP0CE72 109 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 BCL3P20749 454 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 RPL31P62899 125 aaKnown RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 COL10A1Q03692 680 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 SLC9A3R2Q15599 337 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 KISS1Q15726 138 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 PIP4P2Q8N4L2 257 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 C11orf42Q8N5U0 333 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 TBC1D15Q8TC07 691 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 TSEN15Q8WW01 171 aaKnown RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 GHSRQ92847 366 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 METTL8Q9H825 291 aaKnown RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 RHOFQ9HBH0 211 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 NOX4Q9NPH5 578 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 IL36RNQ9UBH0 155 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 MDFIC2A0A1B0GVS7 189 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 A0A1W2PQ09 198 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 TMEM89A2RUT3 159 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 RNASEK-C17orf49H0YIS7 233 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 KDM4BO94953 1096 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 ZP1P60852 638 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 C6orf141Q5SZD1 244 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 RNLSQ5VYX0 342 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 Q6YL49 198 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 C17orf107Q6ZR85 190 aa16.42■□□□□ 0.22
TMEM53-205ENST00000372244 ZSCAN4Q8NAM6 433 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 EMG1Q92979 244 aaKnown RBP16.42■□□□□ 0.22
TMEM53-205ENST00000372244 RFT1Q96AA3 541 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms