RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 RGPD4Q7Z3J3 1758 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 DNPH1O43598 174 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 MDH2P40926 338 aaKnown RBP15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 ZNF766Q5HY98 468 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 SLC25A42Q86VD7 318 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 OR13G1Q8NGZ3 307 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 PTX4Q96A99 478 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 FBXL17Q9UF56 701 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 TRGV10A0A0A0MS01 117 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 FUT5Q11128 374 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 GAB4Q2WGN9 574 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 C9orf40Q8IXQ3 194 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 ALX4Q9H161 411 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 RYDENQ9NUL5 291 aaKnown RBP15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 LANCL1O43813 399 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 OR5AC1P0C628 307 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 INPP5JQ15735 1006 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 ZXDCQ2QGD7 858 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 WDR13Q9H1Z4 485 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 UQCC1Q9NVA1 299 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 ICE1Q9Y2F5 2266 aa15.12■□□□□ 0.01
TRAPPC11-201ENST00000334690 A0A1B0GTQ1 180 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 SOCS1O15524 211 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 SLC25A4P12235 298 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 CA6P23280 308 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 ZNF816Q0VGE8 651 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 PHYHD1Q5SRE7 291 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 TXN2Q99757 166 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 SCN10AQ9Y5Y9 1956 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 ADAM20O43506 726 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 FGF7P21781 194 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 DHRS13Q6UX07 377 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 VASH2Q86V25 355 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 WFDC8Q8IUA0 241 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 SKA3Q8IX90 412 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 OR5C1Q8NGR4 320 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 MTCH1Q9NZJ7 389 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 POMT1Q9Y6A1 747 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 CRYABP02511 175 aaKnown RBP15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 SLC25A6P12236 298 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 RAB13P51153 203 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 CLEC18BQ6UXF7 455 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 NMES1Q9C002 83 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 NTMQ9P121 344 aa15.11■□□□□ 0.01
TRAPPC11-201ENST00000334690 AQP7O14520 342 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 B3GALNT1O75752 331 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 NANOS3P60323 173 aaKnown RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 AARDQ4LEZ3 155 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 GPX7Q96SL4 187 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 TMPRSS13Q9BYE2 586 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 IGKV1D-16P01601 117 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 ASAH2BP0C7U1 165 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 PATE4P0C8F1 98 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 TNFRSF1AP19438 455 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 MEOX1P50221 254 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 IGFBP7Q16270 282 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 OR5M9Q8NGP3 310 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 SLC35B3Q9H1N7 401 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 TRAF3IP2O43734 574 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 TXNDC12O95881 172 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 OR5G3P0C626 314 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 RPS16P62249 146 aaKnown RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 LGALSLQ3ZCW2 172 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 CST2P09228 141 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 VSIG8P0DPA2 414 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 PDZD11Q5EBL8 140 aa15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
TRAPPC11-201ENST00000334690 A0A1W2PPQ1 181 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 DXOO77932 396 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 ONECUT2O95948 504 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 TMEM33P57088 247 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 BPIFB3P59826 476 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 ZNF721Q8TF20 911 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 UBE2L5PA0A1B0GUS4 154 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 GPR37O15354 613 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 ST8SIA5O15466 376 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 HPP00738 406 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 HEXAP06865 529 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 CT45A10P0DMU9 189 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 CEACAM6P40199 344 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 TRAT1Q6PIZ9 186 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 DBX2Q6ZNG2 339 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 SPRED2Q7Z698 418 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 MAFAQ8NHW3 353 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 M0R1X1 148 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 ZNF429Q86V71 674 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 OR10V1Q8NGI7 309 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 C12orf57Q99622 126 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 TCFL5Q9UL49 500 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 NOVA1P51513 510 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 PRSS53Q2L4Q9 553 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 RPL7L1Q6DKI1 246 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 LAIR2Q6ISS4 152 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 NECAP1Q8NC96 275 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 TRAF4Q9BUZ4 470 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 NARFLQ9H6Q4 476 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 WDR54Q9H977 334 aa15.09■□□□□ 0.01
TRAPPC11-201ENST00000334690 PARP14Q460N5 1801 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms