RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SLC35A1P78382 337 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 SLC25A53Q5H9E4 307 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 FAM24BQ8N5W8 94 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 SLC22A8Q8TCC7 542 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 Q96M66 194 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 P4HTMQ9NXG6 502 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 IGKV1-12A0A0C4DH73 117 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 C7orf77A4D0Y5 90 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 IGKV1D-12P01611 117 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 RPS18P62269 152 aaKnown RBP17.26■□□□□ 0.35
CRLF3-201ENST00000324238 ADAM5Q6NVV9 412 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 RHBDD1Q8TEB9 315 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 MAGT1Q9H0U3 335 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 LY6G6EA0A0G2JKS1 128 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 ETV2O00321 342 aaPredicted RBP17.26■□□□□ 0.35
CRLF3-201ENST00000324238 GPR37O15354 613 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 PPP1CCP36873 323 aaKnown RBP17.26■□□□□ 0.35
CRLF3-201ENST00000324238 GUK1Q16774 197 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 KMT5CQ86Y97 462 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 SMCO4Q9NRQ5 59 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 U3KQA8 63 aa17.26■□□□□ 0.35
CRLF3-201ENST00000324238 A0A1W2PPE2 198 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 K7ESF4 209 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 HSPB6O14558 160 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 JTBO76095 146 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 ONECUT2O95948 504 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 PDGFBP01127 241 aaPredicted RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 LYSMD4Q5XG99 296 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 TMEM182Q6ZP80 229 aaPredicted RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 YRDCQ86U90 279 aaKnown RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 RARRES2Q99969 163 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 SRXN1Q9BYN0 137 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 RGCCQ9H4X1 137 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 V9GYS6 101 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 A0A0J9YW62 118 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 PHF1O43189 567 aaPredicted RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 EPHA8P29322 1005 aaPredicted RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 FGFBP3Q8TAT2 258 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 SLAMF9Q96A28 289 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 CRLF2Q9HC73 371 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 PARP11Q9NR21 331 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 DIDO1Q9BTC0 2240 aaKnown RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 S100A6P06703 90 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 CTSDP07339 412 aaPredicted RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 OR10AD1Q8NGE0 317 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 MAFAQ8NHW3 353 aaPredicted RBP17.25■□□□□ 0.35
CRLF3-201ENST00000324238 FAM213BQ8TBF2 198 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 PRDM6Q9NQX0 595 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 PISDQ9UG56 409 aa17.25■□□□□ 0.35
CRLF3-201ENST00000324238 TAAR5O14804 337 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 KCNMB1Q16558 191 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 Q6ZPA2 131 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 ZIC4Q8N9L1 334 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 TM2D1Q9BX74 207 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 SLC2A9Q9NRM0 540 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 SEMA5BQ9P283 1151 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 HDGFL3Q9Y3E1 203 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 SIT1Q9Y3P8 196 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 CDRT15L2A8MXV6 281 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 SGCEO43556 437 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 EIF5AP63241 154 aaKnown RBP17.24■□□□□ 0.35
CRLF3-201ENST00000324238 C9orf135Q5VTT2 229 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 METTL9Q9H1A3 318 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 CHRDQ9H2X0 955 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 IFT22Q9H7X7 185 aa17.24■□□□□ 0.35
CRLF3-201ENST00000324238 A0A0G2JMM0 328 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 A0A1W2PPB8 328 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 A0A1W2PRS3 328 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 KIR3DP1A8MWS1 328 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 NUDT19A8MXV4 375 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 TXNL1O43396 289 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 RD3LP0DJH9 198 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 RAB5BP61020 215 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 CTAG1AP78358 180 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 TMEM187Q14656 261 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 COL19A1Q14993 1142 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 IGSF11Q5DX21 431 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 FBXW12Q6X9E4 464 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 RNF138Q8WVD3 245 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 PP6455Q8WZ26 134 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 PIGCQ92535 297 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 KCNIP3Q9Y2W7 256 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 PUS1Q9Y606 427 aaKnown RBP eCLIP17.23■□□□□ 0.35
CRLF3-201ENST00000324238 DSPP15924 2871 aaKnown RBP17.23■□□□□ 0.35
CRLF3-201ENST00000324238 FAM24AA6NFZ4 105 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 C1orf196B1AJZ1 125 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 LINC00587B1AMM8 73 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 SNCAP37840 140 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 LSM6P62312 80 aaKnown RBP17.23■□□□□ 0.35
CRLF3-201ENST00000324238 CCL20P78556 96 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 H3F3AP84243 136 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 EIF2S3LQ2VIR3 472 aaKnown RBP17.23■□□□□ 0.35
CRLF3-201ENST00000324238 SLC16A14Q7RTX9 510 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 NAA60Q9H7X0 242 aa17.23■□□□□ 0.35
CRLF3-201ENST00000324238 ZIC3O60481 467 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 IGLV3-1P01715 115 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 NQO2P16083 231 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 PTAFRP25105 342 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 SLC23A3Q6PIS1 610 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 TUBD1Q9UJT1 453 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms