RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PTRH2Q9Y3E5 179 aaKnown RBP4.71□□□□□ -1.66
VPS50-202ENST00000305866 LOC400499M0QZD8 3231 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 IGHV1-45A0A0A0MS14 117 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TRBV6-6A0A0A6YYG2 114 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TMEM269A0A1B0GVZ9 245 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ZNF732B4DXR9 585 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 YIF1AO95070 293 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 IFNA2P01563 188 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SERPINA5P05154 406 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 RPL12P30050 165 aaKnown RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 STARP49675 285 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 LBX1P52954 281 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 OR1D5P58170 312 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 LINC00310P59036 64 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 MYBPHQ13203 477 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 EIF4EBP1Q13541 118 aaPredicted RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 RSPO4Q2I0M5 234 aaPredicted RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 TMEM31Q5JXX7 168 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 FAM27BQ5VT28 67 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ZNF343Q6P1L6 599 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TTLL10Q6ZVT0 673 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 HAPLN4Q86UW8 402 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ZIC4Q8N9L1 334 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SLC38A9Q8NBW4 561 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TSTD1Q8NFU3 115 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 AKR7LQ8NHP1 331 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 CLDND2Q8NHS1 167 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 STT3BQ8TCJ2 826 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 EMG1Q92979 244 aaKnown RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SMDT1Q9H4I9 107 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TMEM242Q9NWH2 141 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 IKZF2Q9UKS7 526 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 OR1D4P47884 311 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 AFF3P51826 1226 aaKnown RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 SLC35A1P78382 337 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 MRPS34P82930 218 aaKnown RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 C1orf61Q13536 156 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 HERPUD1Q15011 391 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SLC9A3R2Q15599 337 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 NSDHLQ15738 373 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SSX2Q16385 188 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ZNF506Q5JVG8 444 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 RIPPLY2Q5TAB7 128 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 PRAMEF17Q5VTA0 474 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 GLIPR1L1Q6UWM5 242 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 WDR5BQ86VZ2 330 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SAXO1Q8IYX7 474 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 FBXL14Q8N1E6 418 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 HAS2Q92819 552 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TMEM56Q96MV1 263 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SCGB3A2Q96PL1 93 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SPACA5Q96QH8 159 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 C2orf88Q9BSF0 95 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SUSD2Q9UGT4 822 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TMEM56-RWDD3S4R434 201 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 IGKV3D-15A0A087WSY6 115 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 IGHV5-10-1A0A0J9YXX1 117 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 C1QTNF9BB2RNN3 333 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ST8SIA5O15466 376 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SGCEO43556 437 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 MED6O75586 246 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 NQO2P16083 231 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 CHATP28329 748 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 EPHA8P29322 1005 aaPredicted RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 FCGR2CP31995 323 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 NHLH2Q02577 135 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 HMGN3Q15651 99 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 KHDC3LQ587J8 217 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 NCMAPQ5T1S8 102 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 ZNF585AQ6P3V2 769 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 FAM24BQ8N5W8 94 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 OR56B1Q8NGI3 324 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 OR51E1Q8TCB6 317 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SPACA9Q96E40 222 aaPredicted RBP4.7□□□□□ -1.66
VPS50-202ENST00000305866 SSX3Q99909 188 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 SULT4A1Q9BR01 284 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 OR8D2Q9GZM6 311 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 NIT2Q9NQR4 276 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 MED29Q9NX70 200 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 CRIM1Q9NZV1 1036 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 DOK5Q9P104 306 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 TAAR3PQ9P1P4 343 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 DKKL1Q9UK85 242 aa4.7□□□□□ -1.66
VPS50-202ENST00000305866 NBEAQ8NFP9 2946 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 IGKV1-6A0A0C4DH72 117 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 C11orf98E9PRG8 122 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 SYNGR3O43761 229 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZIC3O60481 467 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 CRTAPO75718 401 aaPredicted RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZFAND5O76080 213 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DIRAS3O95661 229 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 HEXBP07686 556 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 CST2P09228 141 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 P0C879 139 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZNF93P35789 620 aaPredicted RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 FOXL2P58012 376 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 TAS2R46P59540 309 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 RND3P61587 244 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms