RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tspan15F7BWT7 294 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Bbip1J3QMK2 67 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ndufb11O09111 151 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm10881P01642 115 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Supt4h1aP63271 117 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Flrt1Q6RKD8 674 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rsl1Q7M6Y1 485 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Pif1Q80SX8 650 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Zfp747Q8BHM7 422 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Q8BTC1 67 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mrpl22Q8BU88 206 aaKnown RBP11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rrnad1Q8BZG5 475 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Galnt6Q8C7U7 622 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Nfam1Q8R4V1 264 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Arl6ip5Q8R5J9 188 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1008Q8VGC7 313 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mrgpra8Q91ZC4 305 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 NanpQ9CPT3 248 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 9230110F15RikQ9D262 117 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr943Q9EQ92 314 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 C1galt1c1Q9JMG2 316 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm26992S4R1A3 76 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Jbts17Q8CE72 3214 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Pi4kaE9Q3L2 2105 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Col12a1Q60847 3120 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm15737D3YZR0 106 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Dcpp2E9PYC2 171 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm21818J3KMS6 170 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Dcpp1L7N1X9 171 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr329-psM9MMK4 331 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 GamtO35969 236 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 P01882 290 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ca6P18761 317 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ly6fP35460 134 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Klf16P58334 251 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gpr85P60894 370 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rasd2P63032 266 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 S100a13P97352 98 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Slc5a12Q49B93 619 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 PnkdQ69ZP3 385 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Pcyt1bQ811Q9 369 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rspo4Q8BJ73 228 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Prss50Q8BLH5 439 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Spata2lQ8BNN1 426 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Reep4Q8K072 257 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ca15Q99N23 324 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mcts2Q9CQ21 181 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mtfp1Q9CRB8 166 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Sapcd1Q9CY86 146 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Dpep3Q9DA79 493 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Fn3kQ9ER35 309 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Lancl2Q9JJK2 450 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 B3GNT2Q9Z222 397 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 FggyA2AJL3 552 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Zfp944E9PUS4 492 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm20390E9PZF0 267 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rabl2E9Q9D5 223 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Il4P07750 140 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Fcgr1P26151 404 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Dusp1P28563 367 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 SnrpeP62305 92 aaKnown RBP11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Hist1h2baP70696 127 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Nme2Q01768 152 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr18Q0VAX9 331 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Spc25Q3UA16 226 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Pon3Q62087 354 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Fam117aQ7TNF9 451 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cacfd1Q8BG21 171 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Syngr3Q8R191 229 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1280Q8VGG8 305 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Polr2hQ923G2 150 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Bhlhe41Q99PV5 410 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Erv3Q9DAX3 200 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Bex3Q9WTZ9 124 aa11.93□□□□□ -0.5
Nup88-201ENSMUST00000035283 Myo15aQ9QZZ4 3511 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ldlrad1D3YYZ1 218 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 AF067061O70616 171 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 MscO88940 201 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 P01654 111 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 P01656 111 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 P03977 111 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Uba1yP31254 1058 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Sox18P43680 377 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Pax9P47242 342 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 RpiaP47968 303 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Hsd17b8P50171 259 aaKnown RBP11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 CycsP62897 105 aaKnown RBP11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 MENTQ569E4 350 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gnb3Q61011 340 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Nol4lQ6DIB4 494 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Thap4Q6P3Z3 569 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tceal3Q8R0A5 200 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Elac1Q8VEB6 362 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1450Q8VF19 325 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1411Q8VFC4 323 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1138Q8VFQ9 311 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Plekhf2Q91WB4 249 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Slc22a26Q91WJ2 552 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tceal6Q9DB24 200 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ppp1r1aQ9ERT9 171 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms