RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 IGKV1D-12P01611 117 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 EIF4EP06730 217 aaKnown RBP15.73■□□□□ 0.11
SSBP4-212ENST00000601919 DANCRP0C864 163 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 MGMTP16455 207 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 CFHR2P36980 270 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 CCL8P80075 99 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 UNC119Q13432 240 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 OR10K2Q6IF99 312 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 METAP1DQ6UB28 335 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-212ENST00000601919 FIP1L1Q6UN15 594 aaKnown RBP15.73■□□□□ 0.11
SSBP4-212ENST00000601919 BAIAP2L2Q6UXY1 529 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 CMTM4Q8IZR5 234 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 OSR2Q8N2R0 312 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 Q8NFD4 153 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 OR10K1Q8NGX5 313 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 OR10Z1Q8NGY1 313 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 HPS1Q92902 700 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 SLC25A38Q96DW6 304 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 TRAF4Q9BUZ4 470 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-212ENST00000601919 KCNK15Q9H427 330 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 C1orf123Q9NWV4 160 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 MTCH1Q9NZJ7 389 aa15.73■□□□□ 0.11
SSBP4-212ENST00000601919 CHD3Q12873 2000 aaKnown RBP15.73■□□□□ 0.11
SSBP4-212ENST00000601919 IGHV3-64DA0A0J9YX35 117 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 A0A1W2PPR1 153 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 LRRC30A6NM36 301 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 H3BUI4 141 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 IFNL4K9M1U5 179 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 NOS1APO75052 506 aaPredicted RBP15.72■□□□□ 0.11
SSBP4-212ENST00000601919 RHBDL1O75783 438 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 CHRM2P08172 466 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 PGA5P0DJD9 388 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 IRF2P14316 349 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 BCL3P20749 454 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 CPT2P23786 658 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 ETV6P41212 452 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 RPS27AP62979 156 aaKnown RBP15.72■□□□□ 0.11
SSBP4-212ENST00000601919 ZNF45Q02386 682 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 MPPED2Q15777 294 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 C11orf71Q6IPW1 123 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 CNIH2Q6PI25 160 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 WDR82Q6UXN9 313 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 CCDC190Q86UF4 302 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 MOGAT3Q86VF5 341 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 C11orf53Q8IXP5 236 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 POC1AQ8NBT0 407 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 TMEM104Q8NE00 496 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 Q8TCH9 128 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 VRK1Q99986 396 aaPredicted RBP15.72■□□□□ 0.11
SSBP4-212ENST00000601919 SELENOIQ9C0D9 397 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 WDR12Q9GZL7 423 aaKnown RBP15.72■□□□□ 0.11
SSBP4-212ENST00000601919 BANF2Q9H503 90 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 RASL12Q9NYN1 266 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 EXTL2Q9UBQ6 330 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 PPP1R3CQ9UQK1 317 aa15.72■□□□□ 0.11
SSBP4-212ENST00000601919 SPTAN1Q13813 2472 aaKnown RBP15.72■□□□□ 0.11
SSBP4-212ENST00000601919 LRRK2Q5S007 2527 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 FABP12A6NFH5 140 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 CLDN25C9JDP6 229 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 AKR7A2O43488 359 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 TPPPO94811 219 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 NXPH2O95156 264 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 CD8AP01732 235 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 SFTPBP07988 381 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 SOD3P08294 240 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 PTBP1P26599 531 aaKnown RBP eCLIP15.71■□□□□ 0.11
SSBP4-212ENST00000601919 NR4A2P43354 598 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 EFNB2P52799 333 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 FGF12P61328 243 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 FAM58AQ8N1B3 248 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 OR56B1Q8NGI3 324 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 OR51T1Q8NGJ9 327 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 C15orf40Q8WUR7 153 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 C14orf79Q96F83 325 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 NRIP2Q9BQI9 281 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 NUDT16L1Q9BRJ7 211 aaKnown RBP15.71■□□□□ 0.11
SSBP4-212ENST00000601919 TM2D1Q9BX74 207 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 GCM1Q9NP62 436 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 LAMP3Q9UQV4 416 aa15.71■□□□□ 0.11
SSBP4-212ENST00000601919 NPBWR2P48146 333 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 PITPNBP48739 271 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 ZNF846Q147U1 533 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 ZNF181Q2M3W8 571 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 NHLRC3Q5JS37 347 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 TMEM69Q5SWH9 247 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 FAM131AQ6UXB0 335 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 ZNF826PQ6ZT77 177 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 LINC00596Q86U02 117 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 C1orf87Q8N0U7 546 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 ZCCHC24Q8N2G6 241 aaKnown RBP15.7■□□□□ 0.1
SSBP4-212ENST00000601919 OR4M1Q8NGD0 313 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 LRRC29Q8WV35 223 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 NEU4Q8WWR8 484 aaPredicted RBP15.7■□□□□ 0.1
SSBP4-212ENST00000601919 EMG1Q92979 244 aaKnown RBP15.7■□□□□ 0.1
SSBP4-212ENST00000601919 CACNG6Q9BXT2 260 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 LPAR5Q9H1C0 372 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 AKIP1Q9NQ31 210 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 RBFOX1Q9NWB1 397 aaKnown RBP15.7■□□□□ 0.1
SSBP4-212ENST00000601919 RNF7Q9UBF6 113 aa15.7■□□□□ 0.1
SSBP4-212ENST00000601919 GLS2Q9UI32 602 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms