RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 OSR2Q8N2R0 312 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 SPERTQ8NA61 448 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 CXXC4Q9H2H0 198 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 ZMAT3Q9HA38 289 aaKnown RBP17.69■□□□□ 0.42
PNKP-203ENST00000593946 NKIRAS2Q9NYR9 191 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 LINC00854A0A1B0GVQ3 168 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.68■□□□□ 0.42
PNKP-203ENST00000593946 ORC5O43913 435 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 PTTG1O95997 202 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 MELTFP08582 738 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 PRSS3P35030 304 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 GDNFP39905 211 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 INPP1P49441 399 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 SELENOVP59797 346 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 PLAC9Q5JTB6 97 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 DCDC5Q6ZRR9 648 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 DMRTC2Q8IXT2 367 aaPredicted RBP17.68■□□□□ 0.42
PNKP-203ENST00000593946 CENPSQ8N2Z9 138 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 ZNF843Q8N446 348 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 SCCPDHQ8NBX0 429 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 CHST4Q8NCG5 386 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 NPDC1Q9NQX5 325 aaPredicted RBP17.68■□□□□ 0.42
PNKP-203ENST00000593946 KLK11Q9UBX7 282 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 ATP23Q9Y6H3 246 aa17.68■□□□□ 0.42
PNKP-203ENST00000593946 TMEM235A6NFC5 223 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 SHISA9B4DS77 424 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 AKR7A2O43488 359 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 BCL3P20749 454 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 CDNFQ49AH0 187 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 ZNF57Q68EA5 555 aaPredicted RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 Q6ZTK2 550 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 RTN4RL2Q86UN3 420 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 FBXL14Q8N1E6 418 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 MINDY2Q8NBR6 621 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 GPX8Q8TED1 209 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 RAB3CQ96E17 227 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 ELF5Q9UKW6 265 aaPredicted RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 ZSCAN5BA6NJL1 495 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 F5H5P2 479 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 TRAPPC2LH3BP13 241 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 H7C417 338 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 SULT1C2O00338 296 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 HIST1H1DP16402 221 aaKnown RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 GNB3P16520 340 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 RBM11P57052 281 aaKnown RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 GUCA2AQ02747 115 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 MAB21L1Q13394 359 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 ADIPOQQ15848 244 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 TRIM16LQ309B1 348 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 PIGYQ3MUY2 71 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 GTF3AQ92664 365 aaKnown RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 SEH1LQ96EE3 360 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 C11orf54Q9H0W9 315 aaPredicted RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 SCPEP1Q9HB40 452 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 RBFOX1Q9NWB1 397 aaKnown RBP17.67■□□□□ 0.42
PNKP-203ENST00000593946 MTFP1Q9UDX5 166 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 POU2F3Q9UKI9 436 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 KCNK7Q9Y2U2 307 aa17.67■□□□□ 0.42
PNKP-203ENST00000593946 PLSCR5A0PG75 271 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 F8VVB4 439 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 F8VWA3 439 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 RHBDL1O75783 438 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 C1QL1O75973 258 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 LPLP06858 475 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 GSTP1P09211 210 aaKnown RBP17.66■□□□□ 0.42
PNKP-203ENST00000593946 BLVRBP30043 206 aaPredicted RBP17.66■□□□□ 0.42
PNKP-203ENST00000593946 SRP9P49458 86 aaKnown RBP17.66■□□□□ 0.42
PNKP-203ENST00000593946 FGF12P61328 243 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 BEX5Q5H9J7 111 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 NHLRC3Q5JS37 347 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 TOMM5Q8N4H5 51 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 POM121Q96HA1 1249 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 ARHGAP5-AS1Q96IT6 56 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 TLNRD1Q9H1K6 362 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.66■□□□□ 0.42
PNKP-203ENST00000593946 TAAR3PQ9P1P4 343 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 ST3GAL6Q9Y274 331 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 POLDIP2Q9Y2S7 368 aa17.66■□□□□ 0.42
PNKP-203ENST00000593946 KMT2BQ9UMN6 2715 aaPredicted RBP17.65■□□□□ 0.42
PNKP-203ENST00000593946 ZNF462Q96JM2 2506 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 MFNGO00587 321 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 SIAH2O43255 324 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 CD3EP07766 207 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 GABRR1P24046 479 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 MZT1Q08AG7 82 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 KLF9Q13886 244 aaPredicted RBP17.65■□□□□ 0.42
PNKP-203ENST00000593946 DAZAP2Q15038 168 aaPredicted RBP17.65■□□□□ 0.42
PNKP-203ENST00000593946 TAF9Q16594 264 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 C11orf91Q3C1V1 193 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 SIGIRRQ6IA17 410 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 GDPD3Q7L5L3 318 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 BATF2Q8N1L9 274 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 OR2Z1Q8NG97 314 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 RHOFQ9HBH0 211 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 PKDREJQ9NTG1 2253 aa17.65■□□□□ 0.42
PNKP-203ENST00000593946 FLNCQ14315 2725 aa17.64■□□□□ 0.42
PNKP-203ENST00000593946 A0A1B0GVG6 124 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 GEMIN2O14893 280 aaKnown RBP17.64■□□□□ 0.41
PNKP-203ENST00000593946 LYRM1O43325 122 aa17.64■□□□□ 0.41
PNKP-203ENST00000593946 GRPP07492 148 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms