RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 IGKV1D-12P01611 117 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 ACAA1P09110 424 aaPredicted RBP12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 BCL3P20749 454 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 PTGFRP43088 359 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 LRRC28Q86X40 367 aaPredicted RBP12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 MUC20Q8N307 709 aaPredicted RBP12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 SEH1LQ96EE3 360 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 ELL3Q9HB65 397 aaPredicted RBP12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 ING4Q9UNL4 249 aa12.97□□□□□ -0.33
RPRD1A-208ENST00000589050 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 IGHV4-61A0A0C4DH41 118 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 F8VVB4 439 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 F8VWA3 439 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 KDM4BO94953 1096 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 FSTL3O95633 263 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 NPBWR2P48146 333 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 MTNR1BP49286 362 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 ERVK11-1P61568 191 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 MICBQ29980 383 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 SMIM21Q3B7S5 101 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 ZNF404Q494X3 552 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 TMEM155Q4W5P6 130 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 GPR107Q5VW38 600 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 TEX36Q5VZQ5 186 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 ACP7Q6ZNF0 438 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 LYPD6Q86Y78 171 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 FAM90A1Q86YD7 464 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 Q8IYB0 196 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 PXT1Q8NFP0 134 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 S100A13Q99584 98 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 GFI1Q99684 422 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 GAL3ST1Q99999 423 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 TMEM246Q9BRR3 403 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 TMEM165Q9HC07 324 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 HES4Q9HCC6 221 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 RBFOX1Q9NWB1 397 aaKnown RBP12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 NLKQ9UBE8 527 aa12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 MRPS28Q9Y2Q9 187 aaKnown RBP12.96□□□□□ -0.33
RPRD1A-208ENST00000589050 CDRT1O95170 752 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 GYPAP02724 150 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 CALCBP10092 127 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 RAB3BP20337 219 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 USF1P22415 310 aaPredicted RBP12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 TGFBR1P36897 503 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 PSMD7P51665 324 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 OR10A3P58181 314 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 RSU1Q15404 277 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 KCNJ8Q15842 424 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 AWAT2Q6E213 333 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 GLIPR1L1Q6UWM5 242 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 ANKRD13BQ86YJ7 626 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 SPICQ8N5J4 248 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 OR5T2Q8NGG2 359 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 OR4D6Q8NGJ1 314 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 OR10K1Q8NGX5 313 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 CLDND2Q8NHS1 167 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 EMG1Q92979 244 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 NAA50Q9GZZ1 169 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 PLGRKTQ9HBL7 147 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 V9GY05 133 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 CSMD1Q96PZ7 3565 aa12.95□□□□□ -0.34
RPRD1A-208ENST00000589050 DYSFO75923 2080 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 A0A096LNT2 108 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 SMIM30A4D0T7 59 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 SFTPBP07988 381 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 CD37P11049 281 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 SDC2P34741 201 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 MXD1Q05195 221 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 C1orf100Q5SVJ3 147 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 ASCL4Q6XD76 172 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 DCDC5Q6ZRR9 648 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 SLC16A12Q6ZSM3 486 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 TPRA1Q86W33 373 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 CLVS1Q8IUQ0 354 aaPredicted RBP12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 FAM58AQ8N1B3 248 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 OR6M1Q8NGM8 313 aa12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 C12orf43Q96C57 262 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-208ENST00000589050 OR2AT4A6NND4 320 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 CEACAM18A8MTB9 384 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 H7C1Q1 480 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 SLC17A2O00624 439 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 SLC22A1O15245 554 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 GABARAPO95166 117 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 HTR3BO95264 441 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 PRKACAP17612 351 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 SERPINA2P20848 420 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 HTR2CP28335 458 aa12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 SNU13P55769 128 aaKnown RBP12.93□□□□□ -0.34
RPRD1A-208ENST00000589050 VBP1P61758 197 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms