RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 MTHFD2LQ9H903 347 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 IL21RQ9HBE5 538 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM9BQ9NQ34 198 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 NRIP3Q9NQ35 241 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 G6PC2Q9NQR9 355 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 FGF21Q9NSA1 209 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF586Q9NXT0 402 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ABI3Q9P2A4 366 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 PADI3Q9ULW8 664 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 FNDC1Q4ZHG4 1894 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 BTAF1O14981 1849 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 LY75O60449 1722 aa5.34□□□□□ -1.56
SMAD4-203ENST00000585448 COL2A1P02458 1487 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ITGB4P16144 1822 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TRBV7-9A0A0J9YWB2 115 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 A0A1B0GW15 77 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF860A6NHJ4 632 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 IFITM5A6NNB3 132 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 LINC00473A8K010 186 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TRAF3IP2O43734 574 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 GNG7O60262 68 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 GLSO94925 669 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 CD160O95971 181 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 HSPB1P04792 205 aaKnown RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 DANCRP0C864 163 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF286BP0CG31 522 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 PPIAL4GP0DN37 164 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 OR12D1P0DN82 309 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ALPPL2P10696 532 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 CEACAM1P13688 526 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 FBLP22087 321 aaKnown RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 PRPH2P23942 346 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 GDF1P27539 372 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 HTR1FP30939 366 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 PLA2G5P39877 138 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 THPOP40225 353 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 HMGCS2P54868 508 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 RAB38P57729 211 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TPPP2P59282 170 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TAS2R20P59543 309 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 SRPXP78539 464 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 HLA-DRB3P79483 266 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TIAL1Q01085 375 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ID2Q02363 134 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 MMDQ15546 238 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 DUSP5Q16690 384 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 MIDNQ504T8 468 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ACSM3Q53FZ2 586 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 CTSL3PQ5NE16 218 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 FCRL6Q6DN72 434 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF343Q6P1L6 599 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TOMM20LQ6UXN7 152 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF429Q86V71 674 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 APOBEC3FQ8IUX4 373 aaKnown RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 CMTM8Q8IZV2 173 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 RYBPQ8N488 228 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF615Q8N8J6 731 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZDHHC22Q8N966 263 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TMEM229BQ8NBD8 167 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 CYB561A3Q8NBI2 242 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 OR52L1Q8NGH7 329 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 OR2T27Q8NH04 317 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 LGALS14Q8TCE9 139 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 RNF133Q8WVZ7 376 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZG16BQ96DA0 208 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 SLC25A38Q96DW6 304 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 SEH1LQ96EE3 360 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 LMLNQ96KR4 655 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 GPR21Q99679 349 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 TMEM106BQ9NUM4 274 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF319Q9P2F9 582 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 GALPQ9UBC7 116 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 DKK4Q9UBT3 224 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 KLK11Q9UBX7 282 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 IL36AQ9UHA7 158 aa5.33□□□□□ -1.56
SMAD4-203ENST00000585448 MRPS17Q9Y2R5 130 aaKnown RBP5.33□□□□□ -1.56
SMAD4-203ENST00000585448 BRCA1P38398 1863 aaKnown RBP5.32□□□□□ -1.56
SMAD4-203ENST00000585448 STRCP1A6NGW2 1772 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 A0A0G2JMZ2 1700 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 LRRC37A2A6NM11 1700 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 LRRC37AA6NMS7 1700 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.32□□□□□ -1.56
SMAD4-203ENST00000585448 PPIAL4EA0A075B759 164 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 BORCS7-ASMTA0A0B4J1R7 106 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 PPIAL4CA0A0B4J2A2 164 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 A1L4Q6 167 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 MAP1LC3B2A6NCE7 125 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF727A8MUV8 499 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 PPIAL4DF5H284 164 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 H3BNC9 293 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 HSD17B6O14756 317 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 YPEL1O60688 119 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 RAMP1O60894 148 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 RAD51DO75771 328 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 C1QL1O75973 258 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 PPP1R3DO95685 299 aa5.32□□□□□ -1.56
SMAD4-203ENST00000585448 TBX6O95947 436 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-203ENST00000585448 CSTBP04080 98 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms