RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 MRPL28Q13084 256 aaKnown RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 DGUOKQ16854 277 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 SMIM21Q3B7S5 101 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 XAF1Q6GPH4 301 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 FDX2Q6P4F2 183 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 RBMS3Q6XE24 437 aaKnown RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 EGFL6Q8IUX8 553 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 FAM185AQ8N0U4 392 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 BCL6BQ8N143 479 aaPredicted RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 POC1AQ8NBT0 407 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 OR5D18Q8NGL1 313 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 ANGPTL6Q8NI99 470 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 PP6455Q8WZ26 134 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 TMEM158Q8WZ71 300 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 TFAP2CQ92754 450 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 LHX4Q969G2 390 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 C12orf43Q96C57 262 aaKnown RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 GAFA1Q96PS6 74 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 DUX5Q96PT3 197 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 ZNF649Q9BS31 505 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 VCX3BQ9H321 246 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 CNTD2Q9H8S5 307 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 TNFRSF19Q9NS68 423 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 BABAM2Q9NXR7 383 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 RASL12Q9NYN1 266 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 ZNF69Q9UC07 566 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 DIMT1Q9UNQ2 313 aaKnown RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 POLR3KQ9Y2Y1 108 aaPredicted RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 SOX21Q9Y651 276 aaPredicted RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 HSPE1-MOB4S4R3N1 261 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 IGKV1D-17A0A075B6S4 117 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 A0A1W2PRD5 423 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 A0A1W2PRF3 423 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 A0A1W2PRM7 423 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 SLC1A7O00341 560 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 MYL12BO14950 172 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 MAGEB3O15480 346 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 ANGPTL7O43827 346 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 FCN3O75636 299 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 ECDO95905 644 aaPredicted RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 ACAA1P09110 424 aaPredicted RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 PGA5P0DJD9 388 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 DUSP1P28562 367 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 TGM4P49221 684 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 PAX2Q02962 417 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 KLF17Q5JT82 389 aaPredicted RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 RPL22L1Q6P5R6 122 aaKnown RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 BRD3OSQ6XYD6 125 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 ZNF788Q6ZQV5 615 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 Q6ZSR3 168 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 KRT74Q7RTS7 529 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 SERPINA12Q8IW75 414 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 MKXQ8IYA7 352 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 CD177Q8N6Q3 437 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 OR4M1Q8NGD0 313 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 OR5D14Q8NGL3 314 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 EMG1Q92979 244 aaKnown RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 C10orf35Q96D05 121 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 CEP19Q96LK0 163 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 OPALINQ96PE5 141 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 GPER1Q99527 375 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 ZCCHC4Q9H5U6 513 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 SCN3BQ9NY72 215 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 MTCH1Q9NZJ7 389 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 KAAG1Q9UBP8 84 aa9.15□□□□□ -0.94
DDB1-222ENST00000543627 RPUSD1Q9UJJ7 312 aaKnown RBP9.15□□□□□ -0.94
DDB1-222ENST00000543627 IGKV1-9A0A0C4DH69 117 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 A0A1W2PPK0 400 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 MEX3AA1L020 520 aaKnown RBP9.14□□□□□ -0.95
DDB1-222ENST00000543627 ZNF879B4DU55 563 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 F8VVB4 439 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 F8VWA3 439 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 SIGLEC5O15389 551 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 VENTXO95231 258 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 LIPFP07098 398 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 TMEM225BP0DP42 221 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 PIPP12273 146 aaPredicted RBP9.14□□□□□ -0.95
DDB1-222ENST00000543627 BCL3P20749 454 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 C21orf33P30042 268 aaPredicted RBP9.14□□□□□ -0.95
DDB1-222ENST00000543627 NPBWR2P48146 333 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 SCN1BQ07699 218 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 IL24Q13007 206 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 CDK5R1Q15078 307 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 GPR157Q5UAW9 335 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 RUSC1-AS1Q66K80 236 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 LAIR2Q6ISS4 152 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 IZUMO2Q6UXV1 221 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 LHFPL2Q6ZUX7 228 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 RNF144BQ7Z419 303 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 SIGLECL1Q8N7X8 197 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 OR13C5Q8NGS8 318 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 GPR148Q8TDV2 347 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 ZDHHC16Q969W1 377 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 CNBD2Q96M20 576 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 WDFY2Q96P53 400 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 NKX3-1Q99801 234 aaPredicted RBP9.14□□□□□ -0.95
DDB1-222ENST00000543627 SUCNR1Q9BXA5 334 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 PKIBQ9C010 78 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 576.3 ms