RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 HPP00738 406 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 VSIG4Q9Y279 399 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 A0A1W2PPV9 198 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 ZNF732B4DXR9 585 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 POU2F2P09086 479 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 MYF5P13349 255 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 GLB1P16278 677 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 GALR1P47211 349 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 MYBPHQ13203 477 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 AARDQ4LEZ3 155 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 ERGIC1Q969X5 290 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 ADGRG7Q96K78 797 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 PRSS27Q9BQR3 290 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 A0A0B4J293 547 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 SHISA8B8ZZ34 492 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 CTSDP07339 412 aaPredicted RBP17.21■□□□□ 0.35
SUDS3-204ENST00000543473 MRGPREQ86SM8 312 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 FAM219AQ8IW50 185 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 OR5AS1Q8N127 324 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 KLHDC1Q8N7A1 406 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 RGP1Q92546 391 aaPredicted RBP17.21■□□□□ 0.35
SUDS3-204ENST00000543473 LRRC3BQ96PB8 259 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 SIRPB1O00241 398 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 KCNAB3O43448 404 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 CD1AP06126 327 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 C1QL3Q5VWW1 255 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 C19orf48Q6RUI8 117 aa17.21■□□□□ 0.35
SUDS3-204ENST00000543473 LILRB1Q8NHL6 650 aaPredicted RBP17.21■□□□□ 0.35
SUDS3-204ENST00000543473 MUC1P15941 1255 aaPredicted RBP17.2■□□□□ 0.34
SUDS3-204ENST00000543473 FABP6P51161 128 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 EDDM3BP56851 147 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 OR1N1Q8NGS0 311 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 WNT16Q9UBV4 365 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 DHRS3O75911 302 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 ZIC2O95409 532 aaPredicted RBP17.2■□□□□ 0.34
SUDS3-204ENST00000543473 OPN1MWP04001 364 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 OPN1MW2P0DN77 364 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 OPN1MW3P0DN78 364 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 MICBQ29980 383 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 ATG4DQ86TL0 474 aaPredicted RBP17.2■□□□□ 0.34
SUDS3-204ENST00000543473 SLC25A38Q96DW6 304 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 MS4A10Q96PG2 267 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 SOX7Q9BT81 388 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 MAP1LC3B2A6NCE7 125 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 CDRT15L2A8MXV6 281 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 ALG1L2C9J202 215 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 PLPP3O14495 311 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 B4GALT1P15291 398 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 PACRGQ96M98 296 aaPredicted RBP17.2■□□□□ 0.34
SUDS3-204ENST00000543473 RTL8AQ9BWD3 113 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 MAP1LC3BQ9GZQ8 125 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 C3orf85A0A1B0GTC6 90 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 FGF2P09038 288 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 SLC25A6P12236 298 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 PNRC1Q12796 327 aaPredicted RBP17.2■□□□□ 0.34
SUDS3-204ENST00000543473 EXT1Q16394 746 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 ZNF573Q86YE8 665 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 APH1AQ96BI3 265 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 LANCL2Q9NS86 450 aa17.2■□□□□ 0.34
SUDS3-204ENST00000543473 NAT2P11245 290 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 H2BFSP57053 126 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 POLR2GP62487 172 aaKnown RBP eCLIP17.19■□□□□ 0.34
SUDS3-204ENST00000543473 CD226Q15762 336 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 PRSS53Q2L4Q9 553 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 POLDIP2Q9Y2S7 368 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 TRPM6Q9BX84 2022 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 DVL1O14640 695 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 GATCO43716 136 aaKnown RBP17.19■□□□□ 0.34
SUDS3-204ENST00000543473 CST2P09228 141 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 TMEM267Q0VDI3 215 aaPredicted RBP17.19■□□□□ 0.34
SUDS3-204ENST00000543473 LANCL3Q6ZV70 420 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 SNX22Q96L94 193 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 TLNRD1Q9H1K6 362 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 C5orf49A4QMS7 147 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 K7EQS6 105 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 CLN5O75503 358 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 TNFSF4P23510 183 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 RAB40CQ96S21 281 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 GABRG3Q99928 467 aa17.19■□□□□ 0.34
SUDS3-204ENST00000543473 IGHV3-64DA0A0J9YX35 117 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 IGHEP01854 428 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 HIST1H3AP68431 136 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 LDLRAD3Q86YD5 345 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 ZPLD1Q8TCW7 415 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 VSTM2LQ96N03 204 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 GPR87Q9BY21 358 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 CES1P1Q9UKY3 287 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 SHISA3A0PJX4 238 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 TFF2Q03403 129 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 FUT7Q11130 342 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 ZNF468Q5VIY5 522 aaPredicted RBP17.18■□□□□ 0.34
SUDS3-204ENST00000543473 ZDHHC23Q8IYP9 409 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 WNT2BQ93097 391 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 MEGF10Q96KG7 1140 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 TCAPO15273 167 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 P2RY1P47900 373 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 DLK1P80370 383 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 GGTLC2Q14390 218 aa17.18■□□□□ 0.34
SUDS3-204ENST00000543473 SLC10A1Q14973 349 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms