RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	ZNF773	Q6PK81	442 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CRIP3	Q6Q6R5	217 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF841	Q6ZN19	808 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	C9orf139	Q6ZV77	190 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF554	Q86TJ5	538 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MOGAT3	Q86VF5	341 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	GLCCI1	Q86VQ1	547 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	COMMD2	Q86X83	199 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PHC2	Q8IXK0	858 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PNLDC1	Q8NA58	520 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	LY6G5B	Q8NDX9	201 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR4M2	Q8NGB6	313 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR8B3	Q8NGG8	313 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR5D13	Q8NGL4	314 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR13C3	Q8NGS6	347 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PIGC	Q92535	297 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	RGP1	Q92546	391 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	GTF3A	Q92664	365 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	UFD1	Q92890	307 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMEM186	Q96B77	213 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MSI2	Q96DH6	328 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ADAT3	Q96EY9	351 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CEP19	Q96LK0	163 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	DERL3	Q96Q80	235 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR8B2	Q96RD0	313 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MGLL	Q99685	303 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	GAL3ST1	Q99999	423 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PDCD1LG2	Q9BQ51	273 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMEM246	Q9BRR3	403 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MRI1	Q9BV20	369 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	METTL17	Q9H7H0	456 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF696	Q9H7X3	374 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	BRD7	Q9NPI1	651 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	UBAP1	Q9NZ09	502 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	TREM2	Q9NZC2	230 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	NLK	Q9UBE8	527 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	AASS	Q9UDR5	926 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CLEC2D	Q9UHP7	191 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	SF3B6	Q9Y3B4	125 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	KPTN	Q9Y664	436 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ATR	Q13535	2644 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	NF1	P21359	2839 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	KIAA2026	Q5HYC2	2103 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A087WXM4	84 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TRAV1-2	A0A0B4J238	106 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	KIR2DS1	A0A191URI9	304 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TRDV1	A0A1B0GX56	115 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A1W2PPH5	198 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	FUOM	A2VDF0	154 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	NKX6-3	A6NJ46	265 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525		A6NLC8	198 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR2AT4	A6NND4	320 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PTGES3L	E9PB15	166 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CCRL2	O00421	344 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	MAGEB4	O15481	346 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	ENSA	O43768	121 aa	Known RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	LMX1B	O60663	402 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	LY6H	O94772	140 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	BPNT1	O95861	308 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CHRM2	P08172	466 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	RPS2	P15880	293 aa	Known RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GLRA1	P23415	457 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	BDKRB2	P30411	391 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	HAAO	P46952	286 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PITPNB	P48739	271 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GPM6A	P51674	278 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	MTCP1	P56278	107 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	FGF12	P61328	243 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	IL13RA1	P78552	427 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	EMX1	Q04741	257 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	MEF2C	Q06413	473 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PAX8	Q06710	450 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	MPV17L	Q2QL34	196 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GFOD2	Q3B7J2	385 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMEM30B	Q3MIR4	351 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TIMM50	Q3ZCQ8	353 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	C1orf100	Q5SVJ3	147 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	WDR25	Q64LD2	544 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	XAF1	Q6GPH4	301 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	HAGHL	Q6PII5	290 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CLEC9A	Q6UXN8	241 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	ACP7	Q6ZNF0	438 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	USP43	Q70EL4	1123 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TPRA1	Q86W33	373 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	SPART	Q8N0X7	666 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GAPT	Q8N292	157 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CIART	Q8N365	385 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR51A4	Q8NGJ6	313 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR51A2	Q8NGJ7	313 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PPP1R35	Q8TAP8	253 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	NPRL2	Q8WTW4	380 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	LRRC29	Q8WV35	223 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZFAND2B	Q8WV99	257 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TSEN15	Q8WW01	171 aa	Known RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GATAD2B	Q8WXI9	593 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PTX4	Q96A99	478 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMIGD2	Q96BF3	282 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms