RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PDCD1LG2Q9BQ51 273 aa2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZNF426Q9BUY5 554 aa2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 CCDC94Q9BW85 323 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 SLIRPQ9GZT3 109 aaKnown RBP2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 PARP12Q9H0J9 701 aaKnown RBP2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 PORCNQ9H237 461 aa2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR52D1Q9H346 318 aa2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 C1orf109Q9NX04 203 aa2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 SHROOM3Q8TF72 1996 aa2.07□□□□□ -2.08
HMGB1P49-201ENST00000418882 FAM240AA0A1B0GVK7 77 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 SLC5A10A0PJK1 596 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 GOLGA8IPA6NC78 632 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 GOLGA8JA6NMD2 632 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 GOLGA8KD6RF30 607 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 GOLGA8MH3BSY2 632 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 H7C2Y5 167 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 LGALS9O00182 355 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 LIN7AO14910 233 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 ATP8B1O43520 1251 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 CYTH3O43739 400 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 OCMP0CE72 109 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 GOLGA8HP0CJ92 632 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 C1GALT1C1LP0DN25 315 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 COX5BP10606 129 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 PAX6P26367 422 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 S100A5P33763 92 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 GGT2P36268 569 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 CXCL12P48061 93 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 RGS6P49758 472 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 AP1S2P56377 157 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 CLDN12P56749 244 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 TAS2R31P59538 309 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 ACTBP60709 375 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 TSPAN5P62079 268 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 PPP1CBP62140 327 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 ACTG1P63261 375 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 TCP10Q12799 353 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 STX4Q12846 297 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR1Q1Q15612 314 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 IGFBP7Q16270 282 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 RBM48Q5RL73 367 aaKnown RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 RESP18Q5W5W9 173 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 NIPAL1Q6NVV3 410 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZFP1Q6P2D0 407 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 CASP12Q6UXS9 341 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 CALHM1Q8IU99 346 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 SLC30A8Q8IWU4 369 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 BLIDQ8IZY5 108 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 MIR7-3HGQ8N6C7 128 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 PHOSPHO2Q8TCD6 241 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 RCN3Q96D15 328 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 SHCBP1LQ9BZQ2 653 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 NSRP1Q9H0G5 558 aaKnown RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 LRRC19Q9H756 370 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 PSTPIP2Q9H939 334 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 RGS18Q9NS28 235 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 TMEM100Q9NV29 134 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 PLEKHJ1Q9NW61 149 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 RBFOX1Q9NWB1 397 aaKnown RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 TBL2Q9Y4P3 447 aaKnown RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 FBN1P35555 2871 aaKnown RBP2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 SEC16AO15027 2179 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 SDK2Q58EX2 2172 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 DCAF1Q9Y4B6 1507 aa2.06□□□□□ -2.08
HMGB1P49-201ENST00000418882 SMIM26A0A096LP01 95 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 A0A0A6YYH2 397 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 A0A1B0GTI1 187 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 C5orf63A6NC05 138 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 A6NJ64 397 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 GATCO43716 136 aaKnown RBP2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 AHSA1O95433 338 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 HLA-DQA1P01909 254 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 ORM1P02763 201 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 CTSLP07711 333 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR5AL1P0C617 328 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 LIMS3P0CW19 117 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 LIMS4P0CW20 117 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 EVI2BP34910 448 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 SSTR5P35346 364 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 PCK1P35558 622 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 MAGEA2P43356 314 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR12D2P58182 307 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 RPS23P62266 143 aaKnown RBP2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 SLC35A1P78382 337 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 IL5RAQ01344 420 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 CD164Q04900 197 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 FLOT2Q14254 428 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 TRAM1Q15629 374 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 IDNKQ5T6J7 187 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 FAM173BQ6P4H8 233 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 WDFY1Q8IWB7 410 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 LRRC34Q8IZ02 419 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 RIBC1Q8N443 379 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 CBR4Q8N4T8 237 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 SPICQ8N5J4 248 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 LFNGQ8NES3 379 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 PIFOQ8TCI5 191 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 DYNC2LI1Q8TCX1 351 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms