RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ISL1P61371 349 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 MIDNQ504T8 468 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 FDX2Q6P4F2 183 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 Q8IYB0 196 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 Q8N7P7 452 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 DTX3Q8N9I9 347 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 DNAAF1Q8NEP3 725 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 PYDC1Q8WXC3 89 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 TNFRSF14Q92956 283 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 Q96MT0 163 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 TTTY10Q9BZA0 68 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 CHIAQ9BZP6 476 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 HEXA-AS1Q9H8Q6 139 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 H0YAE9 185 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 MAGEB4O15481 346 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 PAHP00439 452 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 KNG1P01042 644 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 CHRM2P08172 466 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 CCR9P51686 369 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 CAPZA1P52907 286 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 ERVK11-1P61568 191 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 RPL31P62899 125 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 ELF3P78545 371 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 CNN3Q15417 329 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 SSX6Q7RTT6 188 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 FGFRL1Q8N441 504 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 TBX5Q99593 518 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 C9orf16Q9BUW7 83 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 CHST5Q9GZS9 411 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 C1RLQ9NZP8 487 aa11.92□□□□□ -0.5
NIF3L1-205ENST00000409588 DAPL1A0PJW8 107 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 CLPSL1A2RUU4 121 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 E9PQ18 207 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 RNASEK-C17orf49H0YIS7 233 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 EBAG9O00559 213 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 CYB5AP00167 134 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 TGFBR2P37173 567 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 RAG2P55895 527 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 ACTA2P62736 377 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 ACTG2P63267 376 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 MRPL28Q13084 256 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 AANATQ16613 207 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 OLFML2AQ68BL7 652 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 MKXQ8IYA7 352 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 ACBD7Q8N6N7 88 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 CD177Q8N6Q3 437 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 HAVCR2Q8TDQ0 301 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 NEK6Q9HC98 313 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 SIRT7Q9NRC8 400 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 GNG8Q9UK08 70 aa11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-205ENST00000409588 H3BNX3 289 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 J3QRE1 110 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 K7N7A8 449 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 EI24O14681 340 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 SLC16A6O15403 523 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 SYNGR1O43759 233 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 ENTPD6O75354 484 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 TK1P04183 234 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 SELLP14151 372 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 MDKP21741 143 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 PRKACBP22694 351 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 RBP2P50120 134 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 ATP1B3P54709 279 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 KPNB1Q14974 876 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 UBE2V2Q15819 145 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 UTS2BQ765I0 119 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 BORCS8Q96FH0 119 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 CEP19Q96LK0 163 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 MEGF9Q9H1U4 602 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 RHOFQ9HBH0 211 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 INPP5EQ9NRR6 644 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 ZNRD1Q9P1U0 126 aa11.9□□□□□ -0.5
NIF3L1-205ENST00000409588 FAM230AA0A1W2PPH8 454 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 MEIOCA2RUB1 952 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 GPR137BO60478 399 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 FADS2O95864 444 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 RBP4P02753 201 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF85Q03923 595 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 DMRTC1Q5HYR2 192 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 TMEM200BQ69YZ2 307 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 ANGPTL5Q86XS5 388 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 PDZD9Q8IXQ8 264 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 PRSS35Q8N3Z0 413 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 CBR4Q8N4T8 237 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 ZSCAN4Q8NAM6 433 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 OR2G2Q8NGZ5 317 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 RNFT2Q96EX2 444 aa11.89□□□□□ -0.51
NIF3L1-205ENST00000409588 C16orf95Q9H693 158 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms