RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RAB6AP20340 208 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 BCL3P20749 454 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 EFNB2P52799 333 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 GPR176Q14439 515 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 ELP2Q6IA86 826 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 CDH24Q86UP0 819 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 LAX1Q8IWV1 398 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 CEP19Q96LK0 163 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 CST11Q9H112 138 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 PEX16Q9Y5Y5 336 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 DSCAMO60469 2012 aa22.85■■□□□ 1.25
SSBP4-202ENST00000348495 RGS5O15539 181 aa22.84■■□□□ 1.25
SSBP4-202ENST00000348495 POC1AQ8NBT0 407 aa22.84■■□□□ 1.25
SSBP4-202ENST00000348495 FAM46BQ96A09 425 aa22.84■■□□□ 1.25
SSBP4-202ENST00000348495 ZNF488Q96MN9 340 aa22.84■■□□□ 1.25
SSBP4-202ENST00000348495 RAB22AQ9UL26 194 aa22.84■■□□□ 1.25
SSBP4-202ENST00000348495 TRAPPC2LH3BP13 241 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 OVOL3O00110 214 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 CDC14BO60729 498 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 HPXP02790 462 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 SERPINA2P20848 420 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 UBE2NLQ5JXB2 153 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 LINC00299Q6ZSB3 139 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 BIVMQ86UB2 503 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 OR10Z1Q8NGY1 313 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 RAB1BQ9H0U4 201 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 ABCG5Q9H222 651 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 RHOFQ9HBH0 211 aa22.83■■□□□ 1.25
SSBP4-202ENST00000348495 RBFOX1Q9NWB1 397 aaKnown RBP22.83■■□□□ 1.25
SSBP4-202ENST00000348495 TPD52L2O43399 206 aaKnown RBP22.82■■□□□ 1.24
SSBP4-202ENST00000348495 HTR3BO95264 441 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 APOA1P02647 267 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 ELK1P19419 428 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 WDFY2Q96P53 400 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 BANF2Q9H503 90 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 RHBDL2Q9NX52 303 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 PPP1R3CQ9UQK1 317 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 CRYBG3Q68DQ2 2970 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 AKR7A2O43488 359 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 CRTAPO75718 401 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-202ENST00000348495 LHBP01229 141 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 EIF4EP06730 217 aaKnown RBP22.82■■□□□ 1.24
SSBP4-202ENST00000348495 MGMTP16455 207 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 SSTR2P30874 369 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 RBMXP38159 391 aaKnown RBP22.82■■□□□ 1.24
SSBP4-202ENST00000348495 ART1P52961 327 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 MRPS24Q96EL2 167 aaKnown RBP22.82■■□□□ 1.24
SSBP4-202ENST00000348495 HES4Q9HCC6 221 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 PCDHB16Q9NRJ7 776 aa22.82■■□□□ 1.24
SSBP4-202ENST00000348495 hCG_1807616A0A1W2PRN6 198 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 MPIG6BO95866 241 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 CSTBP04080 98 aaKnown RBP22.81■■□□□ 1.24
SSBP4-202ENST00000348495 GTF2F2P13984 249 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 LRRC28Q86X40 367 aaPredicted RBP22.81■■□□□ 1.24
SSBP4-202ENST00000348495 TGIF2LYQ8IUE0 185 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 Q8IYB0 196 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 CMTM4Q8IZR5 234 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 BATF2Q8N1L9 274 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 LRRC29Q8WV35 223 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 MARVELD3Q96A59 401 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 TMEM59Q9BXS4 323 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 LPAR5Q9H1C0 372 aa22.81■■□□□ 1.24
SSBP4-202ENST00000348495 C3orf80F5H4A9 247 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 TNFSF8P32971 234 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 S100A5P33763 92 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 FGF12P61328 243 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 RPS27AP62979 156 aaKnown RBP22.8■■□□□ 1.24
SSBP4-202ENST00000348495 ZNF181Q2M3W8 571 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 OSR2Q8N2R0 312 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 GCSAMQ8N6F7 178 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 HMG20AQ9NP66 347 aa22.8■■□□□ 1.24
SSBP4-202ENST00000348495 SRRM5B3KS81 715 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 HOXA4Q00056 320 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-202ENST00000348495 OR51T1Q8NGJ9 327 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 NEU4Q8WWR8 484 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-202ENST00000348495 RAB40AQ8WXH6 277 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 Q96M66 194 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 TM2D1Q9BX74 207 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 RNF7Q9UBF6 113 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 CACNG2Q9Y698 323 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 PTPN13Q12923 2485 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 DYSFO75923 2080 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 TANC2Q9HCD6 1990 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-202ENST00000348495 CDKN1AP38936 164 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 NHLRC3Q5JS37 347 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 FAM58AQ8N1B3 248 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 OR11L1Q8NGX0 322 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 SELENOIQ9C0D9 397 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 TREM2Q9NZC2 230 aa22.79■■□□□ 1.24
SSBP4-202ENST00000348495 AKAP6Q13023 2319 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 EGR1P18146 543 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 LSAMPQ13449 338 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 HIST2H2BCQ6DN03 193 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 FAM89BQ8N5H3 189 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 WDR13Q9H1Z4 485 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 ADAM30Q9UKF2 790 aa22.78■■□□□ 1.24
SSBP4-202ENST00000348495 A0A0A6YYD4 124 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 IGHV1-69-2A0A0G2JMI3 117 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 WNT9BO14905 357 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms