RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GPR176Q14439 515 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 RSU1Q15404 277 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 TMEM69Q5SWH9 247 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 CST11Q9H112 138 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 ELL3Q9HB65 397 aaPredicted RBP16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 IL36GQ9NZH8 169 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 ABCA4P78363 2273 aa16.02■□□□□ 0.16
PDLIM3-202ENST00000284770 ICE1Q9Y2F5 2266 aa16.02■□□□□ 0.16
PDLIM3-202ENST00000284770 ISPDA4D126 451 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 CDIPTO14735 213 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 CTDSPLO15194 276 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 SYNGR1O43759 233 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 TPPPO94811 219 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 CD55P08174 381 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 SNRPD2P62316 118 aaKnown RBP16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 TNFAIP6P98066 277 aaPredicted RBP16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 PRAMEF6Q5VXH4 476 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 C11orf53Q8IXP5 236 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 TMEM104Q8NE00 496 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 OR10K1Q8NGX5 313 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 MEGF10Q96KG7 1140 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 DYNLRB1Q9NP97 96 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 MTCH1Q9NZJ7 389 aa16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 MRPS7Q9Y2R9 242 aaKnown RBP16.02■□□□□ 0.15
PDLIM3-202ENST00000284770 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 SPTAN1Q13813 2472 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 A0A1W2PQ09 198 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 DANCRP0C864 163 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 COX6B1P14854 86 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 SERPINA2P20848 420 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 GATA4P43694 442 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 TAS2R20P59543 309 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 PITPNAQ00169 270 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 MPPED2Q15777 294 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 FAM209AQ5JX71 171 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 AGAP6Q5VW22 663 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 CDH24Q86UP0 819 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 ZCCHC24Q8N2G6 241 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 FAM46BQ96A09 425 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 SLAMF9Q96A28 289 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 ATG5Q9H1Y0 275 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 PCDHB16Q9NRJ7 776 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 CBLN4Q9NTU7 201 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 FBXO9Q9UK97 447 aaPredicted RBP16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 POLDIP2Q9Y2S7 368 aa16.01■□□□□ 0.15
PDLIM3-202ENST00000284770 A0A1W2PP11 408 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 CDC14BO60729 498 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 CRTAPO75718 401 aaPredicted RBP16■□□□□ 0.15
PDLIM3-202ENST00000284770 RHBDL1O75783 438 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 CSTBP04080 98 aaKnown RBP16■□□□□ 0.15
PDLIM3-202ENST00000284770 SFTPBP07988 381 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 SPRNQ5BIV9 151 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 Q8NFD4 153 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 ITLN1Q8WWA0 313 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 DIABLOQ9NR28 239 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 A0A0A6YYH2 397 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 A6NJ64 397 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 TRAPPC2LH3BP13 241 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 HTR3BO95264 441 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 SOD3P08294 240 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 ACAA1P09110 424 aaPredicted RBP16■□□□□ 0.15
PDLIM3-202ENST00000284770 NPBWR2P48146 333 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 RGS21Q2M5E4 152 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 PCGF3Q3KNV8 242 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 DTX2Q86UW9 622 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 TRIM63Q969Q1 353 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 LPAR5Q9H1C0 372 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 BANF2Q9H503 90 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 OCEL1Q9H607 264 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 UFSP2Q9NUQ7 469 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 TBC1D24Q9ULP9 559 aa16■□□□□ 0.15
PDLIM3-202ENST00000284770 A6NLC8 198 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 RAB27BO00194 218 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 GSTZ1O43708 216 aaPredicted RBP15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 MPIG6BO95866 241 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 CD8AP01732 235 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 GTF2F2P13984 249 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 MGMTP16455 207 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 BCL3P20749 454 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 CCL8P80075 99 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 DGCR2P98153 550 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 TLE4Q04727 773 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 MOGAT2Q3SYC2 334 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 ELP2Q6IA86 826 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 WDR82Q6UXN9 313 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 MRPS24Q96EL2 167 aaKnown RBP15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 GAL3ST1Q99999 423 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 TMEM59Q9BXS4 323 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 UBTD1Q9HAC8 227 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 RHOFQ9HBH0 211 aa15.99■□□□□ 0.15
PDLIM3-202ENST00000284770 METTL21EPA6NDL7 271 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 LANCL1O43813 399 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 PGA5P0DJD9 388 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 TNFRSF1AP19438 455 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 PPOXP50336 477 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 RPS27AP62979 156 aaKnown RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 SCN1BQ07699 218 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 TESK1Q15569 626 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 C11orf71Q6IPW1 123 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 ZNF826PQ6ZT77 177 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms