RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ZIC3O60481 467 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 MED6O75586 246 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 ZNF708P17019 499 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 ACKR3P25106 362 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 EPHA8P29322 1005 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-215ENST00000617482 OPRM1P35372 400 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 STARD6P59095 220 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 TAF9Q16594 264 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 TMEM95Q3KNT9 176 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 C10orf128Q5T292 105 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 RPUSD3Q6P087 351 aaKnown RBP10.31□□□□□ -0.76
C11orf54-215ENST00000617482 TMEM54Q969K7 222 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 SMIM3Q9BZL3 60 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 ULBP2Q9BZM5 246 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 C1orf123Q9NWV4 160 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 DNAJB11Q9UBS4 358 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 MLXQ9UH92 298 aa10.31□□□□□ -0.76
C11orf54-215ENST00000617482 MUC1P15941 1255 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-215ENST00000617482 PVALBP20472 110 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-215ENST00000617482 FKBP2P26885 142 aaKnown RBP10.3□□□□□ -0.76
C11orf54-215ENST00000617482 LPAR6P43657 344 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 ID4P47928 161 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 CXCL12P48061 93 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-215ENST00000617482 SP6Q3SY56 376 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 CLEC9AQ6UXN8 241 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 C20orf196Q8IYI0 205 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 SPAG16Q8N0X2 631 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 TMEM123Q8N131 208 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 DUSP23Q9BVJ7 150 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 LIME1Q9H400 295 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 MEMO1Q9Y316 297 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 PCDHGA1Q9Y5H4 931 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 CELSR3Q9NYQ7 3312 aa10.3□□□□□ -0.76
C11orf54-215ENST00000617482 K7ESF4 209 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 MSTNO14793 375 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 SCGB1D2O95969 90 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 GLI4P10075 376 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 NR2C1P13056 603 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 HOXB1P14653 301 aaPredicted RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 NFYBP25208 207 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 POLR2GP62487 172 aaKnown RBP eCLIP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 HFEQ30201 348 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 SGPP2Q8IWX5 399 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 ZIC4Q8N9L1 334 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 OR10Z1Q8NGY1 313 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 DYRK2Q92630 601 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 TOMM40LQ969M1 308 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 SPTSSAQ969W0 71 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 CNTNAP3Q9BZ76 1288 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 CARHSP1Q9Y2V2 147 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 PTRH2Q9Y3E5 179 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 A0A0J9YW62 118 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 FAM221AA4D161 298 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 ZNF850A8MQ14 1090 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 K7EPK0 472 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 NDUFA2O43678 99 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 EIF1BO60739 113 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 OR5H8P0DN80 308 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 LIFP15018 202 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 CAV2P51636 162 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 RSU1Q15404 277 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 IL34Q6ZMJ4 242 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 FAM71E2Q8N5Q1 922 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 FNDC9Q8TBE3 224 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 MRPL24Q96A35 216 aaKnown RBP10.29□□□□□ -0.76
C11orf54-215ENST00000617482 SMIM8Q96KF7 97 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 Q96M66 194 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 NDRG3Q9UGV2 375 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 DKKL1Q9UK85 242 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 PADI1Q9ULC6 663 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 EDARQ9UNE0 448 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 PRELID3BQ9Y3B1 194 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 CACNA1EQ15878 2313 aa10.29□□□□□ -0.76
C11orf54-215ENST00000617482 A0A087WZY1 265 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 IGHV1-45A0A0A0MS14 117 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 NUDT19A8MXV4 375 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 SNAPINO95295 136 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 ONECUT2O95948 504 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 UMODP07911 640 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 H2AFB1P0C5Y9 115 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 FCGR2CP31995 323 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 HIST1H3AP68431 136 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 SURF2Q15527 256 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-215ENST00000617482 HIST2H3PS2Q5TEC6 136 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 GGNBP1Q5YKI7 109 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 OPN5Q6U736 354 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 HIST2H3AQ71DI3 136 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 MAML2Q8IZL2 1156 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-215ENST00000617482 TMEM156Q8N614 296 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 SAP25Q8TEE9 199 aa10.28□□□□□ -0.76
C11orf54-215ENST00000617482 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms